TABLE 1.
Viability of exonuclease-deficient cells lacking RecG, RuvABC, RecA, Rep, UvrD, or RNaseHI
Colony formation by plasmid-free segregants of synthetic lethality constructsa |
||||
---|---|---|---|---|
Other chromosomal mutation(s)b | pAM401 sbcCD+/c | pJJ100 recG+/ΔrecG | pAM390 ruv+/Δruv | pAM490 rnhA+/ΔrnhA |
None, or any 1 or 2 of xonA, xseA, sbcCD, recJ | + | + | + | + |
xonA xseA recJ | + | + | * | − |
xonA sbcCD recJ | + | + | + | + |
xseA sbcCD recJ | + | + | + | + |
xonA xseA sbcCD | + | − | − | − |
rep or uvrD plus any 1 or 2 of xonA, xseA, sbcCD | + | |||
xonA xseA sbcCD recQ | + | |||
xonA xseA sbcCD helD | + | |||
xonA xseA sbcCD dinG | + | |||
xonA xseA sbcCD recF | * | |||
priA300 | + | + | + | + |
xonA xseA sbcCD priA300 | + | + | +d | −e |
As determined by using a synthetic lethality assay (materials and methods). +, plasmid-free segregants form well-developed colonies on LB agar equal to or approaching in size those formed by cells retaining the plasmid (unless indicated otherwise in the text). They also account for 25–75% of the total colonies observed and can be subcultured without difficulty. −, colonies of plasmid-free segregants not detected on either LB or 56/2 minimal salts agar, except as indicated in the text. *, plasmid-free segregants account for >20% of the total colonies observed on LB agar but establish colonies that are much smaller than those formed by cells retaining the plasmid; they establish much stronger colonies on 56/2 minimal salts agar and can be subcultured without difficulty under these conditions. See text for additional details.
The mutations identified were deletions or in some cases (recA and recJ) Tn10 insertions (see Table S1), except for rus-2, which is an orf-56∷IS10 insertion activating rusA, and priA300, which is a base substitution encoding helicase-defective PriAK230R.
The chromosome carries sbcCD+, except as indicated in column 1.
The colonies formed on LB agar are smaller than those established by cells retaining the plasmid, but these two types of colonies are about equal in size on 56/2 minimal salts agar.
Small colonies of plasmid-free segregants detected on 56/2 minimal salts agar, but could not be subcultured.