Table 1. Neutrality tests.
Population | All SNPs | Coding SNPs | Coding | ||||||
S | TajD | p(TajD) | p(MWU) | S | TajD | p(TajD) | p(MWU) | p(HKA) | |
ERAP2 | |||||||||
Yoruba | 45 | 2.05 | 0 | 0 | 10 | 1.43 | 0.004 | 0.017 | 0.525 |
Luhya | 51 | 1.44 | 0.000 | 0.000 | 11 | 0.95 | 0.026 | 0.145 | 0.400 |
Palestinian | 55 | 1.34 | 0.004 | 0.001 | 13 | 1.05 | 0.094 | 0.028 | 0.019 |
Gujarati | 45 | 1.99 | 0 | 0 | 12 | 1.05 | 0.105 | 0.068 | 0.033 |
Han | 38 | 2.68 | 0 | 0 | 9 | 1.95 | 0.008 | 0.001 | 0.150 |
Toscani | 40 | 2.30 | 0 | 0 | 11 | 1.17 | 0.078 | 0.085 | 0.067 |
ERAP1 | |||||||||
Yoruba | 52 | 0.19 | 0.032 | 0.048 | 20 | 0.10 | 0.185 | 0.242 | 0.016 |
Luhya | 55 | −0.06 | 0.113 | 0.139 | 19 | 0.16 | 0.158 | 0.201 | 0.023 |
Palestinian | 58 | 0.38 | 0.196 | 0.038 | 22 | 0.08 | 0.435 | 0.311 | 0 |
Gujarati | 54 | 0.44 | 0.173 | 0.082 | 22 | 0.18 | 0.382 | 0.327 | 0.000 |
Han | 41 | 0.91 | 0.027 | 0.010 | 18 | 0.55 | 0.202 | 0.131 | 0.000 |
Toscani | 49 | 1.07 | 0.012 | 0.007 | 17 | 1.16 | 0.057 | 0.037 | 0.002 |
The number of SNPs (S) and results for the three neutrality tests performed for ERAP2 and ERAP1 using data generated from the six populations are indicated [TajD: Tajima's D; p(TajD): P-value for Tajima's D test; p(MWU): P-value for MWUhigh test; p(HKA): P-value for HKA test]. HKA was performed only for the coding regions of the genes. The complete matrix with summary statistics is presented in Table S1.