Table 1. Result of the expression array: the top twenty induced (upper panel) and top twenty repressed (lower panel) genes.
| TOP 20 induced genes | ||||
| Entrez Gene Name | Entrez Gene ID | Arraya | q-value (%)b | qRTPCR RQ valuec |
| LYZ | 4069 | 5,99 | 0,0000 | 5,41 |
| FOSB | 2354 | 5,48 | 0,0000 | 5,62 |
| IGJ | 3512 | 5,44 | 0,0000 | |
| TRA@ | 6955 | 5,23 | 0,7897 | |
| PAX8 | 7849 | 4,68 | 0,0000 | 2,55 |
| CYBB | 1536 | 4,62 | 0,0000 | |
| TRA@ | 6955 | 4,60 | 0,0000 | |
| HLA-DQA1 | 3117 | 4,56 | 0,0000 | |
| CECR1 | 51816 | 4,49 | 0,0000 | |
| HLA-DQB1 | 3119 | 4,41 | 0,0000 | |
| EGR1 | 1958 | 4,29 | 0,0000 | |
| RNASE6 | 6039 | 3,98 | 0,0000 | |
| SFRP2 | 6423 | 3,91 | 0,0000 | 4,74 |
| GPNMB | 10457 | 3,87 | 0,0000 | 4,97 |
| PABPC1 | 26986 | 3,85 | 0,0000 | |
| MS4A6A | 64231 | 3,84 | 0,0000 | |
| KLF4 | 9314 | 3,74 | 0,7897 | |
| HADHA | 3030 | 3,61 | 0,7897 | |
| FOS | 2353 | 3,61 | 0,0000 | 4,46 |
| IGHG4 | 3503 | 3,52 | 0,7897 |
a
Array mean ratio are expressed in log2.
b
Q-values (i.e. minimal false discovery rate) are expressed in percent, all P-values are less than 0.001.
c
Validation with qRTPCR: RQ values are expressed in log2.
Bold characters indicate genes that are validated (13 of 14 tested) among these 40 genes.