Table 3.
Event Studied | Number of Families | Average Number of Sequences | Average Number of Sites | Families without Significanta Signal for CBD |
Families with significanta signal for CBD |
|||
Number of Families (%) | Mean Branch Lengthb | Number of Families (%) | Percentage of BADASP Sites (%) | Mean Branch Length | ||||
Duplication 3R | 549 | 9.1 | 391.8 | 549 (100) | 0.134 | 0 (0) | NA | NA |
Speciation tetrapods–fishes | 4,024 | 16.2 | 355.2 | 4003 (99.5) | 0.245 | 21 (0.5) | 9.7 | 0.900 |
Duplication 2R | 1,014 | 31.3 | 231.0 | 1010 (99.6) | 0.305 | 4 (0.4) | 12.7 | 1.592 |
Speciation chordates–insects | 1,234 | 28.0 | 256.2 | 1217 (98.6) | 0.430 | 17 (1.4) | 10.3 | 1.149 |
Cutoff at 4%, based on simulation data, and Q value threshold at 10%.
In amino acid substitutions.