Skip to main content
. 2010 Sep 20;11(9):3413–3433. doi: 10.3390/ijms11093413

Table 2.

Statistical performance of QSAR models from 100 times of 51-chemical-hold-out testing (mean and standard deviation) for PKCθ inhibitors.

Paraa RF SVM PLS

Training Test Training Test Training Test
Size 157 51 157 51 157 51
R2 0.95 ± 0.003 0.58 ± 0.09 0.82 ± 0.01 0.49 ± 0.10 0.64 ± 0.13 0.41 ± 0.13
Q2 0.57 ± 0.03 - 0.59 ± 0.02 - 0.39 ± 0.11 -
R2pred - 0.56 ± 0.09 - 0.45 ± 0.10 - 0.10 ± 0.84
SEE 0.24 ± 0.01 - 0.39 ± 0.01 - 0.53 ± 0.09 -
SEP - 0.59 ± 0.06 - 0.63 ± 0.05 - 0.79 ± 0.25
a

R2, coefficient of determination; Q2, cross-validated R2: Q2 based on OOB, 10-fold cross-validation and leave-one-out for RF, SVM and PLS, respectively; R2pred, predictive correlation coefficient for the test set; SEE, standard error of estimate; SEP, standard error of prediction; -, not applicable or available.