Table 2.
Major properties of the most abundant ESTs in RindPdigS
| Cluster | Best BlastX match | Accession No. | E-value | No ESTs (RindPdigS) | No ESTs (RindPdig24) | Log2(E/A) | Log2(W/A) | Log2(I/A) | Transcriptional profilea |
|---|---|---|---|---|---|---|---|---|---|
| P-02 | No blast match | - | - | 11 | 0 | -0.07 ± 0.28 | -0.26 ± 0.53 | 1.51 ± 1.41 | I > EWA |
| P-03 | FAD-binding domain containing protein [Arabidopsis thaliana] | NP_181025.1 | 1.E-08 | 11 | 0 | 0.52 ± 0.27 | 0.59 ± 0.60 | 3.11 ± 0.42 | I>EW > A |
| P-01 | DAHP synthase [Vitis vinifera] | AAN77866.1 | 3E-26 | 10 | 2 | 0.99 ± 0.24 | 1.65 ± 0.34 | 2.62 ± 0.32 | I>W>E > A |
| P-07 | ACC oxidase [Citrus sinensis] | AAG49361.1 | 5E-36 | 9 | 4 | * | * | * | I>EW > A |
| P-10 | Embryo-abundant protein-related [Arabidopsis thaliana] | NP_181669.1 | 3E-25 | 7 | 0 | 1.85 ± 0.26 | ** | 2.41 ± 0.40 | I>E > WA |
| P-09 | Ribosomal L18ae protein family [Aspergillus nidulans] | EAA66532.1 | 9E-32 | 6 | 0 | -0.15 ± 0.13 | ** | 0.93 ± 0.80 | I > EWA |
| P-04 | Cystinosin homolog [Arabidopsis thaliana] | P57758 | 5E-35 | 5 | 0 | 1.46 ± 0.13 | -0.17 ± 0.22 | -0.05 ± 0.28 | E > IWA |
| P-05 | No blast match | - | - | 5 | 0 | 0.17 ± 0.24 | -0.01 ± 0.25 | 0.49 ± 0.79 | I > EWA |
| P-11 | homogentisic acid geranylgeranyl transferase [Triticum aestivum] | AAP43912.1 | 8E-12 | 5 | 3 | 0.85 ± 0.80 | 0.82 ± 0.46 | 1.90 ± 0.31 | I>EW > A |
| P-06 | ABC transporter family protein [Arabidopsis thaliana] | NP_181179.2 | 1E-19 | 4 | 0 | -0.36 ± 0.17 | 0.01 ± 0.06 | 1.28 ± 0.20 | I > EWA |
| P-08 | ACC oxidase [Citrus sinensis] | AAG49361.1 | 2E-60 | 4 | 4 | * | * | * | I>EW > A |
| P-14 | Cyclase family protein [Arabidopsis thaliana] | NP_567957.1 | 2E-37 | 4 | 0 | 0.80 ± 0.31 | -0.38 ± 0.35 | -0.67 ± 0.24 | E > IWA |
| P-15 | 40 S ribosomal protein S5 [Aspergillus nidulans] | XP_658447.1 | 3E-30 | 4 | 2 | * | * | * | I > EWA |
| P-46 | Dicyanin [Lycopersicon esculentum] | AAF66242.1 | 3E-33 | 4 | 0 | 0.05 ± 0.01 | 1.77 ± 0.59 | 2.66 ± 0.37 | I>W > EA |
| P-53 | No blast match | - | - | 4 | 4 | -0.05 ± 0.12 | -1.38 ± 0.19 | -1.41 ± 0.10 | EA > IW |
| P-62 | Caffeine synthase [Theobroma cacao] | BAE79730.1 | 2E-20 | 4 | 0 | * | * | * | I |
aRelative expression level after treatment with air (A), ethylene (E), wounding (W) or P. digitatum infection (I) as determined by macroarray hybridazation.
*No expression was detected in control tissue.
**No expression was detected in wounded tissue.