Table 3.
RindPdigS clones showing the highest induction in response to P. digitatum infection according to macroarray hybridization
| Clone/Cluster | Best BlastX match | Accession No. | E-value | No ESTs (RindPdigS) | No ESTs (RindPdig24) | I/W macroarraya | I/W Northernb |
|---|---|---|---|---|---|---|---|
| P-18 | hypothetical protein AN7411.2 [Aspergillus nidulans] | EAA61782.1 | 2E-28 | 3 | 0 | ||
| P-32 | short-chain dehydrogenase Tic32 [Pisum sativum] | AAS38575.1 | 3E-33 | 2 | 0 | ||
| P-62 | Caffeine synthase [Theobroma cacao] | BAE79730.1 | 2E-20 | 4 | 0 | 24.25 | |
| N14G12 | No blast match | 1 | 0 | ||||
| N17C02 | No blast match | 1 | 0 | ||||
| N17E11 | expressed protein [Arabidopsis thaliana] | NP_190988.1 | 3E-06 | 1 | 0 | ||
| P-43 | Cytochrome P450 79A1 (Tyrosine N-monooxygenase | Q43135 | 3E-29 | 2 | 0 | 11.54 | 27.93 |
| P-27 | nectarin 5 [Nicotiana langsdorffii x Nicotiana sanderae] | AAP30841.1 | 7E-15 | 3 | 0 | 9.15 ± 0.77 | |
| P-31 | ADP/ATP carrier protein [Penicillium chrysogenum] | BAC82547.1 | 1E-16 | 2 | 0 | 8.67 | |
| P-26 | Unknown protein [Arabidopsis thaliana] | AAL32635.1 | 2E-24 | 2 | 0 | 8.23 | |
| N14G04 | nectarin 5 [Nicotiana langsdorffii x Nicotiana sanderae] | AAP30841.1 | 4E-46 | 1 | 0 | 7.69 | |
| N06E04 | polygalacturonase [Penicillium digitatum] | BAA77297.1 | 5E-22 | 1 | 1 | 7.52 | |
| P-10 | Embryo-abundant protein-related [Arabidopsis thaliana] | NP_181669.1 | 3E-25 | 7 | 0 | 6.99 ± 0.77 | * |
| N07B09 | expressed protein [Arabidopsis thaliana] | NP_565660.1 | 2E-13 | 1 | 0 | 6.62 | |
| P-03 | FAD-binding domain containing protein [Arabidopsis thaliana] | NP_181025.1 | 1.E-08 | 11 | 0 | 6.32 ± 1.35 | * |
| N08F02 | probable tropinone reductase [Arabidopsis thaliana] | C84693 | 2E-21 | 1 | 1 | 6.14 | 2.46 |
| N11D06 | EF1-alpha translation elongation factor [Sordaria macrospora] | CAA65435.1 | 3E-24 | 1 | 0 | 5.88 | |
| N08C11 | chloroplast ribosomal protein L1 [Pisum sativum] | CAA58020.1 | 2E-50 | 1 | 5.56 | ||
| N07E06 | dehydration-responsive protein, [Arabidopsis thaliana] | NP_174468.1 | 4E-83 | 1 | 0 | 4.58 | |
| P-16 | pleiotropic drug resistance like protein [Nicotiana tabacum]) | BAB92011.1 | 2E-15 | 3 | 0 | 5.94 ± 5.64 | 2.86 |
| P-21 | P0468B07.6 [Oryza sativa] | NP_915910.1 | 7E-06 | 2 | 1 | 4.20 ± 0.24 | 7.90 |
| N12G08 | mitochondrial phosphate translocator [Medicago truncatula] | AH59632.1 | 2E-57 | 1 | 0 | 4.13 | |
| P-02 | No blast match | 11 | 0 | 4.76 ± 2.08 | 30.72 | ||
| N13E10 | cellular apoptosis susceptibility protein, putative [Arabidopsis thaliana] | NP_182175.1 | 2E-15 | 1 | 0 | 4.03 | 7.12 |
| P-07 | ACC oxidase [Citrus sinensis] | AAG49361.1 | 5E-36 | 9 | 4 | 4.05 ± 0.61 |
aGene expression ratios in infected (I) vs wounded (W) tissue according to macroarray hybridization.
bGene expression ratios in infected (I) vs wounded (W) tissue according to Northern hybridization.
*Expresion not detected in wounded tissue