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. Author manuscript; available in PMC: 2010 Oct 19.
Published in final edited form as: J Mol Biol. 2010 May 24;400(4):715–723. doi: 10.1016/j.jmb.2010.05.038

Table 3. SSA-Galβ1,3GalNAc interactions a.

Ligand atom b Direct contact (Å) Interaction partner
Gal O4 2.8 Asn22 OD1
2.8 Glu25 N
Gal O3 2.9 Asn22 ND2
3.0 Asn46 ND2
2.7 Wat25
Gal 02 2.8 Wat45
Gal C6-O6 3.3-3.5 Trp24 indole ring
Gal C3-C4 3.6-3.8 Tyr37 phenol ring
GalNAC O4 2.7 Glu25 O
2.8 Wat98
GalNAc O7 3.0 Wat46
GalNAc O1 2.7 Wat130
2.7 Wat118
a

Contact observed in a single subunit within a 3.2 Å and 4.0 Å distance for hydrogen bonds and hydrophobic carbon-carbon interactions, respectively

b

Hydrophobic interactions are indicated in bold.