TABLE I.
Prediction Set Proteins
| Name# | Domain* | Family* |
|---|---|---|
| A-1AJP | Penicillin acylase | Penicillin acylase, catalytic domain |
| A-1AKW | Flavodoxin | Flavodoxin-related |
| A-1APW | Acid protease | Pepsin-like |
| A-1AX1 | Legume lectin | Legume lectins |
| A-1D1P | Tyrosine phosphatase | Low-molecular-weight phosphotyrosine protein |
| A-1ETT | Thrombin | Eukaryotic proteases |
| A-1FDQ | Brain fatty acid binding protein | Fatty acid binding protein-like |
| A-1GJ7 | Urokinase-type plasminogen activator (LMW U-PA) | Eukaryotic proteases |
| A-1GPN | Acetylcholinesterase | Acetylcholinesterase-like |
| A-1J16 | Trypsin(ogen) | Eukaryotic proteases |
| A-1NJD | Thymidylate synthase | Thymidylatesynthase/dCMP hydroxymethylase |
| A-1TCX | Simian immunodeficiency virus (SIV) protease | Retroviral protease (retropepsin) |
| A-2QWF | Influenza neuraminidase | Sialidases (neuraminidases) |
| B-1AB9 | (α, γ)-Chymotrypsin(ogen) | Eukaryotic proteases |
| B-1AFQ | (α, γ)-Chymotrypsin(ogen) | Eukaryotic proteases |
| B-1GG6 | (α, γ)-Chymotrypsin(ogen) | Eukaryotic proteases |
| B-1K2I | (α, γ)-Chymotrypsin(ogen) | Eukaryotic proteases |
| B-7GCH | (α, γ)-Chymotrypsin(ogen) | Eukaryotic proteases |
| B-1SBN | Subtilisin | Subtilases |
| B-1SBT | Subtilisin | Subtilases |
| B-1SUP | Subtilisin | Subtilases |
| B-1TM1 | Subtilisin | Subtilases |
| B-2SIC | Subtilisin | Subtilases |
#
prediction set A or B and PDB code.
*
As defined by the SCOP classification of proteins.