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. Author manuscript; available in PMC: 2011 Sep 1.
Published in final edited form as: Environ Microbiol. 2010 May 7;12(9):2559–2586. doi: 10.1111/j.1462-2920.2010.02229.x

Table 1.

List of Growth-defective mutants of F. tularensis in U937 macrophages and S2 cells grouped according to function.

List of growth defective mutants in both U937 and S2 Cells
Strain Name Locus Tag Gene Description Log reduction in Growth relative to WT
U937 S2
Controls
Wild type 0 0
Intracellular growth locus C IglC 5 5
Proteins of unknown Function
tnfn1_pw060323p08q148 FTN_0027 conserved protein of unknown function 4 6*
tnfn1_pw060510p03q161 FTN_0027 conserved protein of unknown function 2 2*
tnfn1_pw060323p03q103 FTN_0041 protein of unknown function 5 2#
tnfn1_pw060420p01q149 FTN_0041 protein of unknown function 2 3#
tnfn1_pw060420p04q143 FTN_0149 conserved protein of unknown function 5 5
tnfn1_pw060323p02q193 FTN_0275 conserved protein of unknown function 2 2#
tnfn1_pw060419p03q124 FTN_0275 conserved protein of unknown function 2 2#
tnfn1_pw060510p02q121 FTN_0275 conserved protein of unknown function 3 2#
tnfn1_pw060420p04q134 FTN_0297 conserved protein of unknown function 7 7
tnfn1_pw060328p05q119 FTN_0444 membrane protein of unknown function 6 6#
tnfn1_pw060420p03q175 FTN_0444 membrane protein of unknown function 5 5#
tnfn1_pw060323p07q141 FTN_0788 conserved protein of unknown function 5 5
tnfn1_pw060420p04q176 FTN_0855 protein of unknown function 5 2
tnfn1_pw060323p03q147 FTN_0930 protein of unknown function 6 3#
tnfn1_pw060323p05q150 FTN_0930 protein of unknown function 6 3#
tnfn1_pw060510p01q108 FTN_0977 conserved protein of unknown function 7 7
tnfn1_pw060510p01q128 FTN_1170 conserved protein of unknown function 2 3*
tnfn1_pw060418p02q157 FTN_1170 conserved protein of unknown function 2 4*
tnfn1_pw060420p04q196 FTN_1256 membrane protein of unknown function 4 5
tnfn1_pw060323p01q113 FTN_1343 conserved protein of unknown function 4 4#
tnfn1_pw060418p02q105 FTN_1343 conserved protein of unknown function 4 4#
tnfn1_pw060328p02q110 FTN_1457 protein of unknown function 5 5#
tnfn1_pw060420p02q183 FTN_1457 protein of unknown function 6 6#
tnfn1_pw060328p01q172 FTN_1542 conserved protein of unknown function 2 2#
tnfn1_pw060328p02q177 FTN_1713 protein of unknown function 2 2
tnfn1_pw060328p06q155 FTN_1764 protein of unknown function 6 7#
Hypothetical Proteins
tnfn1_pw060323p03q142 FTN_0030 hypothetical membrane protein 4 3#
tnfn1_pw060420p02q155 FTN_0030 hypothetical membrane protein 3 3#
tnfn1_pw060328p06q180 FTN_0038 hypothetical protein 4 4#
tnfn1_pw060419p02q127 FTN_0038 hypothetical protein 2 2#
tnfn1_pw060420p02q173 FTN_0169 conserved hypothetical membrane protein 6 6*
tnfn1_pw060510p01q193 FTN_0169 conserved hypothetical membrane protein 5 5*
tnfn1_pw060328p05q136 FTN_0384 conserved hypothetical protein 4 7
tnfn1_pw060328p05q130 FTN_0534 conserved hypothetical membrane protein 5 7
tnfn1_pw060418p01q143 FTN_0556 hypothetical protein 7 7
tnfn1_pw060419p03q188 FTN_0696 hypothetical membrane protein 2 2#
tnfn1_pw060323p01q155 FTN_0696 hypothetical membrane protein 5 3#
tnfn1_pw060328p06q185 FTN_0709 hypothetical protein 2 7
tnfn1_pw060323p07q129 FTN_0759 conserved hypothetical protein 4 2
tnfn1_pw060419p02q102 FTN_0792 hypothetical protein 5 6#
tnfn1_pw060420p01q167 FTN_0792 hypothetical protein 2 2#
tnfn1_pw060323p02q140 FTN_0895 hypothetical protein 2 2*
tnfn1_pw060323p07q105 FTN_0895 hypothetical protein 4 2*
tnfn1_pw060328p08q188 FTN_1098 conserved hypothetical membrane protein 2 2#
tnfn1_pw060510p03q192 FTN_1098 conserved hypothetical membrane protein 2 2#
tnfn1_pw060510p04q192 FTN_1098 conserved hypothetical membrane protein 7 6#
tnfn1_pw060419p04q117 FTN_1156 hypothetical protein 2 4
tnfn1_pw060328p02q129 FTN_1612 hypothetical protein 2 2
Metabolic Proteins
tnfn1_pw060323p08q120 FTN_0020 carB carbamoyl-phosphate synthase large chain 5 7
tnfn1_pw060419p01q106 FTN_0111 ribH riboflavin synthase beta-chain 4 5
tnfn1_pw060328p06q174 FTN_0125 ackA propionate kinase 2/acetate kinase A 4 4#
tnfn1_pw060418p03q133 FTN_0199 cyoE heme O synthase 2 4
tnfn1_pw060323p04q102 FTN_0211 pcp pyrrolidone carboxylylate peptidase 1 1#
tnfn1_pw060418p03q177 FTN_0211 pcp pyrrolidone carboxylylate peptidase 3 4#
tnfn1_pw060418p01q187 FTN_0319 amino acid-polyamine-organocation family protein 6 7
tnfn1_pw060323p06q113 FTN_0420 SAICAR synthetase/phosphoribosylamine-glycine ligase 7 5
tnfn1_pw060323p05q182 FTN_0504 lysine decarboxylase 4 4
tnfn1_pw060510p01q124 FTN_0507 gcvP1 glycine cleavage system P protein, subunit 1 5 7
tnfn1_pw060510p02q154 FTN_0511 shikimate 5-dehydrogenase 2 2#
tnfn1_pw060510p02q157 FTN_0511 shikimate 5-dehydrogenase 6 6#
tnfn1_pw060510p04q157 FTN_0511 shikimate 5-dehydrogenase 3 2#
tnfn1_pw060323p06q194 FTN_0527 thrC threonine synthase 7 7#
tnfn1_pw060510p01q172 FTN_0527 thrC threonine synthase 5 5#
tnfn1_pw060510p03q172 FTN_0527 thrC threonine synthase 2 2#
tnfn1_pw060323p03q127 FTN_0567 tRNA synthetase class II (D, K and N) 5 2
tnfn1_pw060510p03q171 FTN_0588 asparaginase 2 2
tnfn1_pw060419p03q116 FTN_0593 sucD succinyl-CoA synthetase, alpha subunit 2 2
tnfn1_pw060418p02q128 FTN_0633 katG peroxidase/catalase 7 7
tnfn1_pw060328p06q130 FTN_0692 nadA quinolinate sythetase A 3 2#
tnfn1_pw060419p04q164 FTN_0692 nadA quinolinate sythetase A 2 2#
tnfn1_pw060510p01q159 FTN_0695 add deoxyadenosine deaminase/adenosine deaminase 3 7
tnfn1_pw060328p06q156 FTN_0811 birA biotin--acetyl-CoA-carboxylase ligase 6 7
tnfn1_pw060328p01q128 FTN_0840 mdaB NADPH-quinone reductase (modulator of drug activity B) 5 5
tnfn1_pw060420p02q175 FTN_0877 cls cardiolipin synthetase 7 5
tnfn1_pw060328p06q142 FTN_0954 histidine acid phosphatase 4 4
tnfn1_pw060420p01q130 FTN_0965 metal-dependent exopeptidase 3 3
tnfn1_pw060328p01q151 FTN_0983 bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta subunit 5 3#
tnfn1_pw060328p06q189 FTN_0995 hslV ATP-dependent protease HslVU, peptidase subunit 2 2#
tnfn1_pw060420p04q195 FTN_0995 hslV ATP-dependent protease HslVU, peptidase subunit 2 2#
tnfn1_pw060510p02q187 FTN_1018 aldolase/adducin class II family protein 3 3
tnfn1_pw060323p02q168 FTN_1046 wzb low molecular weight (LMW) phosphotyrosine protein phosphatase 2 2
tnfn1_pw060328p06q184 FTN_1061 acid phosphatase, HAD superfamily protein 2 2#
tnfn1_pw060420p02q103 FTN_1061 acid phosphatase, HAD superfamily protein 3 3#
tnfn1_pw060510p04q113 FTN_1121 phrB deoxyribodipyrimidine photolyase 5 7
tnfn1_pw060328p02q175 FTN_1131 putA bifunctional proline dehydrogenase, pyrroline-5-carboxylate dehydrogenase 6 6
tnfn1_pw060328p02q174 FTN_1135 aroB 3-dehydroquinate synthetase 3 4#
tnfn1_pw060328p03q107 FTN_1222 kpsF phosphosugar isomerase 4 3
tnfn1_pw060510p02q164 FTN_1231 gloA lactoylglutathione lyase 4 4*
tnfn1_pw060420p04q194 FTN_1231 gloA lactoylglutathione lyase 3 5*
tnfn1_pw060510p04q146 FTN_1231 gloA lactoylglutathione lyase 2 2*
tnfn1_pw060510p01q142 FTN_1333 tktA transketolase I 5 5
tnfn1_pw060418p02q109 FTN_1376 disulfide bond formation protein, DsbB family 4 4
tnfn1_pw060328p06q150 FTN_1494 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase 4 7
tnfn1_pw060419p01q104 FTN_1523 amino acid-polyamine-organocation family protein 4 4#
tnfn1_pw060328p02q165 FTN_1523 amino acid-polyamine-organocation family protein 4 5#
tnfn1_pw060419p02q191 FTN_1523 amino acid-polyamine-organocation family protein 2 2#
tnfn1_pw060510p01q118 FTN_1553 nudH dGTP pyrophosphohydrolase 5 5#
tnfn1_pw060418p01q131 FTN_1557 oxidoreductase iron/ascorbate family protein 7 7
tnfn1_pw060420p04q105 FTN_1584 glpD glycerol-3-phosphate dehydrogenase 3 5
tnfn1_pw060419p04q130 FTN_1585 glpK glycerol kinase 3 3
tnfn1_pw060510p01q146 FTN_1597 prfC peptide chain release factor 3 5 5
tnfn1_pw060419p02q112 FTN_1619 appC cytochrome bd-II terminal oxidase subunit I 5 7
tnfn1_pw060328p02q105 FTN_1620 appB cytochrome bd-II terminal oxidase subunit II 6 3
tnfn1_pw060418p04q111 FTN_1621 predicted NAD/FAD-dependent oxidoreductase 3 3#
tnfn1_pw060418p04q112 FTN_1621 predicted NAD/FAD-dependent oxidoreductase 2 2#
tnfn1_pw060420p04q169 FTN_1621 predicted NAD/FAD-dependent oxidoreductase 4 4#
tnfn1_pw060323p04q160 FTN_1655 rluC ribosomal large subunit pseudouridine synthase C 7 7#
tnfn1_pw060510p02q165 FTN_1655 rluC ribosomal large subunit pseudouridine synthase C 2 2#
Transporter Proteins
tnfn1_pw060420p04q149 FTN_0008 10 TMS drug/metabolite exporter protein 4 4#
tnfn1_pw060420p02q151 FTN_0018 sdaC serine permease 2 4
tnfn1_pw060418p04q168 FTN_0141 ABC transporter, ATP-binding protein 5 6#
tnfn1_pw060418p03q147 FTN_0299 putP proline:Na+ symporter 2 2#
tnfn1_pw060510p02q139 FTN_0299 putP proline:Na+ symporter 2 2#
tnfn1_pw060323p03q141 FTN_0619 pseudogene: nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein 3 3*
tnfn1_pw060328p06q129 FTN_0619 pseudogene: nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein 2 5*
tnfn1_pw060510p02q156 FTN_0624 serine permease 2 2*
tnfn1_pw060323p06q164 FTN_0624 serine permease 2 2*
tnfn1_pw060418p01q161 FTN_0636 glpT glycerol-3-phosphate transporter 7 7
tnfn1_pw060419p04q142 FTN_0687 galP1 galactose-proton symporter, major facilitator superfamily (MFS) transport protein 2 3*
tnfn1_pw060510p04q158 FTN_0687 galP1 galactose-proton symporter, major facilitator superfamily (MFS) transport protein 2 2*
tnfn1_pw060328p06q132 FTN_0728 predicted Co/Zn/Cd cation transporter 2 5
tnfn1_pw060418p03q103 FTN_0739 potG ATP-binding cassette putrescine uptake system, ATP-binding protein 2 2#
tnfn1_pw060328p08q153 FTN_0739 potG ATP-binding cassette putrescine uptake system, ATP-binding protein 2 5#
tnfn1_pw060510p04q103 FTN_0799 emrE putative membrane transporter of cations and cationic drugs, multidrug resistance protein 2 2
tnfn1_pw060323p01q177 FTN_0799 emrE putative membrane transporter of cations and cationic drugs, multidrug resistance protein 4 3
tnfn1_pw060328p04q109 FTN_0885 proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter 5 2
tnfn1_pw060328p04q167 FTN_0997 proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter 5 3
tnfn1_pw060323p05q110 FTN_1215 kpsC capsule polysaccharide export protein KpsC 2 5
tnfn1_pw060323p07q172 FTN_1344 major facilitator superfamily (MFS) transport protein 4 4*
tnfn1_pw060420p04q148 FTN_1344 major facilitator superfamily (MFS) transport protein 5 5*
tnfn1_pw060323p01q175 FTN_1441 sugar porter (SP) family protein 4 4#
tnfn1_pw060420p02q182 FTN_1441 sugar porter (SP) family protein 6 6#
tnfn1_pw060419p02q126 FTN_1581 small conductance mechanosensitive ion channel (MscS) family protein 3 3
tnfn1_pw060323p03q106 FTN_1593 oppA ABC-type oligopeptide transport system, periplasmic component 2 2*
tnfn1_pw060420p03q104 FTN_1593 oppA ABC-type oligopeptide transport system, periplasmic component 4 6*
tnfn1_pw060420p01q189 FTN_1611 major facilitator superfamily (MFS) transport protein 7 5
tnfn1_pw060328p02q121 FTN_1716 kdpC potassium-transporting ATPase C chain 2 1*
tnfn1_pw060420p02q159 FTN_1716 kdpC potassium-transporting ATPase C chain 2 2*
tnfn1_pw060418p03q187 FTN_1733 nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein 2 4
Transferases
tnfn1_pw060323p02q177 FTN_0019 pyrB aspartate carbamoyltransferase 2 2#
tnfn1_pw060323p03q119 FTN_0019 pyrB aspartate carbamoyltransferase 2 2#
tnfn1_pw060510p01q103 FTN_0063 ilvE branched-chain amino acid aminotransferase protein (class IV) 3 5
tnfn1_pw060323p03q121 FTN_0343 aminotransferase 7 2
tnfn1_pw060328p03q179 FTN_0358 tRNA-methylthiotransferase MiaB protein 4 4*
tnfn1_pw060419p01q169 FTN_0358 tRNA-methylthiotransferase MiaB protein 2 2*
tnfn1_pw060323p06q168 FTN_0545 glycosyl transferase, group 2 4 4#
tnfn1_pw060419p01q187 FTN_0545 glycosyl transferase, group 2 5 5#
tnfn1_pw060328p01q142 FTN_0928 cysD sulfate adenylyltransferase subunit 2 3 3#
tnfn1_pw060323p03q182 FTN_1428 wbtO transferase 3 2#
tnfn1_pw060510p01q119 FTN_1428 wbtO transferase 2 6#
DNA modifying
tnfn1_pw060323p03q125 FTN_0133 ribonuclease II family protein 2 2
tnfn1_pw060510p02q141 FTN_0133 ribonuclease II family protein 5 5
tnfn1_pw060323p03q122 FTN_0577 mutL DNA mismatch repair enzyme with ATPase activity 7 6#
tnfn1_pw060510p01q148 FTN_0577 mutL DNA mismatch repair enzyme with ATPase activity 5 5#
tnfn1_pw060510p04q193 FTN_0680 uvrC excinuclease ABC, subunit C 6 3
tnfn1_pw060328p04q156 FTN_1027 ruvC holliday junction endodeoxyribonuclease 3 4#
tnfn1_pw060510p01q132 FTN_1027 holliday junction endodeoxyribonuclease 3 3#
tnfn1_pw060510p01q114 FTN_1073 DNA/RNA endonuclease G 5 6*
tnfn1_pw060510p02q114 FTN_1073 DNA/RNA endonuclease G 2 2*
tnfn1_pw060510p01q153 FTN_1154 type I restriction-modification system, subunit S 5 6
tnfn1_pw060323p03q167 FTN_1197 recR RecFOR complex, RecR component 2 4#
tnfn1_pw060510p02q106 FTN_1197 recR RecFOR complex, RecR component 3 3#
tnfn1_pw060328p06q158 FTN_1293 rnhB ribonuclease HII 2 5
tnfn1_pw060323p07q175 FTN_1487 restriction endonuclease 3 6
Cell Division
tnfn1_pw060328p03q149 FTN_0162 ftsQ cell division protein FtsQ 2 2#
tnfn1_pw060328p01q167 FTN_0330 minD septum formation inhibitor-activating ATPase 2 2
Type IV Pilin
tnfn1_pw060323p03q109 FTN_1137 pilQ Type IV pili secretin component 2 2
tnfn1_pw060418p02q167 FTN_1137 pilQ Type IV pili secretin component 4 4
tnfn1_pw060323p06q157 FTN_1139 pilO Type IV pili glycosylation protein 2 2
Others
tnfn1_pw060323p06q138 FTN_0107 lepA GTP-binding protein LepA 2 4#
tnfn1_pw060418p02q123 FTN_0107 lepA GTP-binding protein LepA 2 4#
tnfn1_pw060420p04q150 FTN_0155 competence protein 2 7*
tnfn1_pw060510p04q189 FTN_0155 competence protein 6 3*
tnfn1_pw060418p04q181 FTN_0338 MutT/nudix family protein 2 2
tnfn1_pw060328p06q137 FTN_0465 Sua5/YciO/YrdC family protein 2 2#
tnfn1_pw060323p03q111 FTN_0465 Sua5/YciO/YrdC family protein 2 2#
tnfn1_pw060323p06q115 FTN_0768 tspO tryptophan-rich sensory protein 3 3#
tnfn1_pw060420p03q193 FTN_0768 tspO tryptophan-rich sensory protein 3 3#
tnfn1_pw060510p01q120 FTN_0768 tspO tryptophan-rich sensory protein 3 3#
tnfn1_pw060328p06q167 FTN_0985 DJ-1/PfpI family protein 6 6#
tnfn1_pw060328p06q167 FTN_0985 DJ-1/PfpI family protein 5 5#
tnfn1_pw060420p04q127 FTN_1031 ftnA ferric iron binding protein, ferritin-like 2 6
tnfn1_pw060419p02q137 FTN_1034 rnfB iron-sulfur cluster-binding protein 2 3
tnfn1_pw060420p03q121 FTN_1064 PhoH family protein, putative ATPase 2 4
tnfn1_pw060328p06q178 FTN_1241 DedA family protein 4 5
tnfn1_pw060418p01q185 FTN_1355 regulatory factor, Bvg accessory factor family 6 7
tnfn1_pw060328p03q154 FTN_1453 two-component regulator, sensor histidine kinase 2 2
tnfn1_pw060323p06q110 FTN_1518 relA GDP pyrophosphokinase/GTP pyrophosphokinase 2 2*
tnfn1_pw060323p07q167 FTN_1518 relA GDP pyrophosphokinase/GTP pyrophosphokinase 4 4*
Intergenic
tnfn1_pw060323p03q164 intergenic 3 2
tnfn1_pw060328p06q190 intergenic 3 3
tnfn1_pw060419p03q131 intergenic 2 2
tnfn1_pw060419p04q189 intergenic 5 3
tnfn1_pw060323p08q139 intergenic 4 4
List of growth defective mutants in only U937 Cells
Proteins of unknown function
tnfn1_pw060328p06q147 FTN_0109 protein of unknown function 3#
tnfn1_pw060418p04q193 FTN_0109 protein of unknown function 4#
tnfn1_pw060510p01q123 FTN_0132 protein of unknown function 2
tnfn1_pw060323p07q115 FTN_0290 protein of unknown function 5
tnfn1_pw060328p04q122 FTN_0428 protein of unknown function 2*
tnfn1_pw060510p04q109 FTN_0428 protein of unknown function 2*
tnfn1_pw060419p03q140 FTN_0477 conserved protein of unknown function 2
tnfn1_pw060420p02q178 FTN_0915 conserved protein of unknown function 7
tnfn1_pw060419p04q188 FTN_0925 protein of unknown function 4
tnfn1_pw060420p02q181 FTN_0933 protein of unknown function 7
tnfn1_pw060419p04q118 FTN_1172 conserved protein of unknown function 2
tnfn1_pw060420p01q127 FTN_1175 membrane protein of unknown function 4
tnfn1_pw060420p01q109 FTN_1367 protein of unknown function 2
tnfn1_pw060420p01q132 FTN_1624 conserved protein of unknown function 4
tnfn1_pw060420p02q184 FTN_1696 protein of unknown function 7
Hypothetical Proteins
tnfn1_pw060323p01q181 FTN_0336 hypothetical protein 3
tnfn1_pw060510p01q147 FTN_0403 hypothetical membrane protein 4
tnfn1_pw060323p01q163 FTN_0727 hypothetical membrane protein 3
tnfn1_pw060418p03q110 FTN_0847 conserved hypothetical protein 2#
tnfn1_pw060510p02q108 FTN_0847 conserved hypothetical protein 4#
tnfn1_pw060419p02q152 FTN_0888 hypothetical membrane protein 2
tnfn1_pw060418p01q191 FTN_1349 hypothetical protein 4#
tnfn1_pw060328p06q182 FTN_1395 conserved hypothetical protein 4
tnfn1_pw060328p04q136 FTN_1406 conserved hypothetical membrane protein 4
tnfn1_pw060420p02q127 FTN_1656 conserved hypothetical protein 2
tnfn1_pw060420p02q176 FTN_1686 hypothetical membrane protein 5
tnfn1_pw060418p03q159 FTN_1736 hypothetical protein 2
Metabolic Proteins
tnfn1_pw060419p02q150 FTN_0090 acpA acid phosphatase 5
tnfn1_pw060419p03q169 FTN_0218 nfnB dihydropteridine reductase 2
tnfn1_pw060420p01q123 FTN_0524 asd aspartate semialdehyde dehydrogenase 5
tnfn1_pw060323p06q168 FTN_0545 glycosyl transferase, group 2 5#
tnfn1_pw060419p01q187 FTN_0545 glycosyl transferase, group 2 5#
tnfn1_pw060510p03q168 FTN_0598 tRNA-dihydrouridine synthase 3
tnfn1_pw060328p04q196 FTN_0746 alr alanine racemase 6#
tnfn1_pw060420p04q108 FTN_0822 para-aminobenzoate synthase component I 5
tnfn1_pw060420p04q140 FTN_0957 short chain dehydrogenase 4
tnfn1_pw060420p02q174 FTN_1233 haloacid dehalogenase-like hydrolase 6
tnfn1_pw060420p04q116 FTN_1421 wbtH glutamine amidotransferase/asparagine synthase 3
tnfn1_pw060419p04q135 FTN_1415 thioredoxin 6
tnfn1_pw060510p04q185 FTN_1701 glutamate decarboxylase 3
tnfn1_pw060510p04q136 FTN_1767 rbsK ribokinase, pfkB family 3
tnfn1_pw060328p05q154 FTN_1777 trpG anthranilate synthase component II 2#
Transporter Proteins
tnfn1_pw060420p04q158 FTN_0800 ArsB arsenite/antimonite exporter 2
tnfn1_pw060510p01q152 FTN_1711 tyrP tyrosine permease 6
DNA Modification
tnfn1_pw060419p04q116 FTN_0287 type I restriction-modification system, subunit R (restriction) 2
tnfn1_pw060420p03q134 FTN_0710 type I restriction-modification system, subunit R (restriction) 4
tnfn1_pw060510p04q179 FTN_0838 xthA exodeoxyribonuclease III 3
tnfn1_pw060419p04q152 FTN_1017 pseudogene: DNA-3-methyladenine glycosylase 5
tnfn1_pw060323p04q111 FTN_1176 uvrB excinuclease ABC, subunit B 2
Transferases
tnfn1_pw060420p02q180 FTN_0483 bifunctional NMN adenylyltransferase/Nudix hydrolase 7
tnfn1_pw060510p01q158 FTN_0988 prmA 50S ribosomal protein L11, methyltransferase 7
tnfn1_pw060510p02q144 FTN_1234 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase 6
Transcription/Translation
tnfn1_pw060323p03q127 FTN_0567 tRNA synthetase class II (D, K and N) 2
tnfn1_pw060510p03q168 FTN_0598 tRNA-dihydrouridine synthase 3
tnfn1_pw060419p04q129 FTN_1290 mglA macrophage growth locus, protein A 3#
Others
tnfn1_pw060328p08q161 - isftu1 isftu1 2
tnfn1_pw060510p04q176 FTN_0182 ATP-binding cassette (ABC) superfamily protein 2
tnfn1_pw060323p08q110 FTN_0286 transposase 3
tnfn1_pw060420p01q168 FTN_0646 cscK ROK family protein 5
tnfn1_pw060328p04q123 FTN_0672 secA preprotein translocase, subunit A (ATPase, RNA helicase) 2
tnfn1_pw060328p04q112 FTN_1002 blaA beta-lactamase class A 2#
tnfn1_pw060419p02q192 FTN_1002 blaA beta-lactamase class A 2#
tnfn1_pw060420p02q177 FTN_1145 era GTP-binding protein 6
tnfn1_pw060418p03q107 FTN_1217 ATP-binding cassette (ABC) superfamily protein 2
tnfn1_pw060328p06q171 FTN_1263 comL competence lipoprotein ComL 2#
tnfn1_pw060420p02q179 FTN_1263 comL competence lipoprotein ComL 7#
tnfn1_pw060323p06q110 FTN_1518 relA GDP pyrophosphokinase/GTP pyrophosphokinase 2*
tnfn1_pw060323p07q167 FTN_1518 relA GDP pyrophosphokinase/GTP pyrophosphokinase 4*
Intergenic
tnfn1_pw060328p03q108 intergenic 2
tnfn1_pw060419p04q165 intergenic 5
tnfn1_pw060510p01q102 intergenic 5
tnfn1_pw060510p01q112 intergenic 4
tnfn1_pw060510p01q135 intergenic 4
List of growth defective mutants in only S2 cells according to their functions
Proteins of unknown Function
tnfn1_pw060419p01q176 FTN_0043 conserved protein of unknown function 2
tnfn1_pw060418p01q155 FTN_0044 protein of unknown function 3
tnfn1_pw060418p02q158 FTN_0050 protein of unknown function 4
tnfn1_pw060328p08q104 FTN_0051 conserved protein of unknown function 3
tnfn1_pw060420p01q142 FTN_0052 protein of unknown function 2
tnfn1_pw060419p04q191 FTN_0077 protein of unknown function 3#
tnfn1_pw060323p06q122 FTN_0077 protein of unknown function 2#
tnfn1_pw060510p04q143 FTN_0099 conserved protein of unknown function 2
tnfn1_pw060418p04q193 FTN_0109 protein of unknown function 4
tnfn1_pw060418p04q117 FTN_0207 protein of unknown function containing a von Willebrand factor type A (vWA) domain 2
tnfn1_pw060328p04q119 FTN_0325 membrane protein of unknown function 2
tnfn1_pw060328p08q156 FTN_0340 protein of unknown function 2
tnfn1_pw060323p03q157 FTN_0364 conserved protein of unknown function 2*
tnfn1_pw060418p04q136 FTN_0364 conserved protein of unknown function 3*
tnfn1_pw060328p08q149 FTN_0439 protein of unknown function 4#
tnfn1_pw060418p01q142 FTN_0482 protein of unknown function 6
tnfn1_pw060328p04q110 FTN_0573 protein of unknown function 2
tnfn1_pw060418p02q126 FTN_0573 protein of unknown function 4
tnfn1_pw060328p08q173 FTN_0584 araJ conserved inner membrane protein of unknown function 5
tnfn1_pw060510p04q147 FTN_0599 protein of unknown function 2#
tnfn1_pw060328p06q173 FTN_0599 protein of unknown function 2#
tnfn1_pw060510p01q183 FTN_0782 protein of unknown function 5
tnfn1_pw060323p03q129 FTN_0786 protein of unknown function 7#
tnfn1_pw060323p05q127 FTN_0791 protein of unknown function 3#
tnfn1_pw060419p03q107 FTN_0791 protein of unknown function 2#
tnfn1_pw060418p01q141 FTN_0817 conserved protein of unknown function 2
tnfn1_pw060328p05q126 FTN_0828 protein of unknown function 5
tnfn1_pw060510p04q111 FTN_0861 conserved protein of unknown function 4
tnfn1_pw060418p04q148 FTN_0878 protein of unknown function 2
tnfn1_pw060328p02q106 FTN_0884 drug/metabolite transporter superfamily protein 2#
tnfn1_pw060328p03q163 FTN_0884 drug/metabolite transporter superfamily protein 4#
tnfn1_pw060323p03q150 FTN_0900 protein of unknown function with predicted hydrolase and phosphorylase activity 2#
tnfn1_pw060418p03q108 FTN_0900 protein of unknown function with predicted hydrolase and phosphorylase activity 6#
tnfn1_pw060323p04q104 FTN_0918 conserved protein of unknown function 2#
tnfn1_pw060418p02q131 FTN_0918 conserved protein of unknown function 3#
tnfn1_pw060419p04q188 FTN_0925 protein of unknown function 5
tnfn1_pw060419p04q179 FTN_1001 protein of unknown function 2#
tnfn1_pw060323p07q181 FTN_1001 protein of unknown function 3#
tnfn1_pw060418p02q145 FTN_1020 conserved protein of unknown function 5
tnfn1_pw060419p01q172 FTN_1044 conserved protein of unknown function 3
tnfn1_pw060420p01q111 FTN_1053 outer membrane protein of unknown function 3
tnfn1_pw060420p02q158 FTN_1071 protein of unknown function 5
tnfn1_pw060418p02q133 FTN_1093 protein of unknown function 5
tnfn1_pw060420p01q134 FTN_1103 protein of unknown function 2#
tnfn1_pw060328p01q140 FTN_1103 protein of unknown function 3#
tnfn1_pw060323p08q143 FTN_1235 protein of unknown function 2
tnfn1_pw060510p03q135 FTN_1254 protein of unknown function 4
tnfn1_pw060323p03q102 FTN_1257 membrane protein of unknown function 3#
tnfn1_pw060419p03q150 FTN_1257 membrane protein of unknown function 4#
tnfn1_pw060418p04q121 FTN_1261 protein of unknown function 2
tnfn1_pw060323p08q134 FTN_1270 conserved membrane protein of unknown function 2
tnfn1_pw060418p01q149 FTN_1298 GTPase of unknown function 7
tnfn1_pw060419p01q143 FTN_1334 conserved protein of unknown function 2#
tnfn1_pw060328p08q108 FTN_1334 conserved protein of unknown function 3#
tnfn1_pw060328p05q124 FTN_1372 protein of unknown function 5
tnfn1_pw060323p04q183 FTN_1386 protein of unknown function 3
tnfn1_pw060328p01q156 FTN_1442 conserved protein of unknown function 2#
tnfn1_pw060420p01q165 FTN_1442 conserved protein of unknown function 4#
tnfn1_pw060418p02q186 FTN_1448 protein of unknown function 3
tnfn1_pw060328p02q116 FTN_1449 conserved protein of unknown function 3#
tnfn1_pw060419p03q173 FTN_1449 conserved protein of unknown function 2#
tnfn1_pw060323p07q176 FTN_1534 conserved protein of unknown function 3
tnfn1_pw060328p02q177 FTN_1713 protein of unknown function 3
tnfn1_pw060328p05q185 FTN_1734 protein of unknown function 5
tnfn1_pw060328p08q107 FTN_1774 protein of unknown function 3
Hypothetical Protein
tnfn1_pw060418p04q139 FTN_0011 hypothetical protein 2#
tnfn1_pw060420p02q108 FTN_0012 hypothetical protein 2
tnfn1_pw060420p02q139 FTN_0013 hypothetical protein 3
tnfn1_pw060328p01q141 FTN_0014 conserved hypothetical protein 3
tnfn1_pw060419p04q178 FTN_0028 conserved hypothetical membrane protein 3#
tnfn1_pw060323p04q145 FTN_0028 conserved hypothetical membrane protein 2#
tnfn1_pw060418p04q143 FTN_0053 hypothetical protein 2
tnfn1_pw060328p06q157 FTN_0170 conserved hypothetical membrane protein 5
tnfn1_pw060418p03q151 FTN_0212 hypothetical membrane protein 3
tnfn1_pw060323p08q114 FTN_0326 conserved hypothetical protein 3
tnfn1_pw060328p05q165 FTN_0360 hypothetical protein 5#
tnfn1_pw060419p01q145 FTN_0368 hypothetical protein 2
tnfn1_pw060419p03q186 FTN_0375 hypothetical protein 3
tnfn1_pw060420p02q163 FTN_0398 hypothetical membrane protein 3
tnfn1_pw060420p04q104 FTN_0466 conserved hypothetical protein 4
tnfn1_pw060328p08q148 FTN_0548 conserved hypothetical protein 2#
tnfn1_pw060418p04q176 FTN_0548 conserved hypothetical protein 2#
tnfn1_pw060328p06q164 FTN_0630 hypothetical protein 5
tnfn1_pw060328p05q141 FTN_0701 conserved hypothetical protein 5
tnfn1_pw060418p02q152 FTN_0706 hypothetical membrane protein 3
tnfn1_pw060418p02q175 FTN_0717 conserved hypothetical membrane protein 5
tnfn1_pw060328p06q126 FTN_0732 hypothetical protein 5
tnfn1_pw060323p07q129 FTN_0759 conserved hypothetical protein 2
tnfn1_pw060323p04q134 FTN_0938 hypothetical protein 2#
tnfn1_pw060418p02q170 FTN_0938 hypothetical protein 4#
tnfn1_pw060419p03q187 FTN_1123 conserved hypothetical protein 3
tnfn1_pw060418p04q105 FTN_1180 hypothetical membrane protein 3
tnfn1_pw060420p04q159 FTN_1223 conserved hypothetical membrane protein 7
tnfn1_pw060323p08q166 FTN_1232 conserved hypothetical membrane protein 2
tnfn1_pw060328p03q180 FTN_1260 hypothetical membrane protein 2
tnfn1_pw060510p01q184 FTN_1299 hypothetical protein 5
tnfn1_pw060419p04q127 FTN_1342 conserved hypothetical protein 3
tnfn1_pw060328p05q157 FTN_1379 pseudogene: hypothetical membrane protein, fragment 5
tnfn1_pw060323p06q178 FTN_1389 conserved hypothetical membrane protein 3#
tnfn1_pw060420p01q172 FTN_1389 conserved hypothetical membrane protein 2#
tnfn1_pw060420p01q153 FTN_1458 conserved hypothetical protein 2
tnfn1_pw060323p04q147 FTN_1761 pseudogene: hypothetical protein, fragment 3
tnfn1_pw060418p04q149 FTN_1765 conserved hypothetical protein 2
Metabolic
tnfn1_pw060510p02q160 FTN_0021 carA carbamoyl-phosphate synthase small chain 2
tnfn1_pw060418p04q115 FTN_0095 nitroreductase 7
tnfn1_pw060420p02q191 FTN_0113 ribC riboflavin synthase alpha chain 6
tnfn1_pw060328p05q159 FTN_0118 serine peptidase, S49 family 3#
tnfn1_pw060420p02q187 FTN_0118 serine peptidase, S49 family 5#
tnfn1_pw060328p06q139 FTN_0127 gabD succinate semialdehyde dehydrogenase (NAD(P)+ dependent) 5
tnfn1_pw060510p01q130 FTN_0154 rimK glutathione synthase/ribosomal protein S6 modification enzyme 3
tnfn1_pw060328p01q150 FTN_0168 lysU lysyl-tRNA synthetase 2#
tnfn1_pw060510p02q178 FTN_0217 L-lactate dehydrogenase 2
tnfn1_pw060323p07q113 FTN_0362 deoxyribodipyrimidine photolyase-related protein 4
tnfn1_pw060323p04q144 FTN_0406 sterol desaturase 3#
tnfn1_pw060418p01q189 FTN_0406 sterol desaturase 6#
tnfn1_pw060328p06q134 FTN_0443 maeA NAD-dependent malic enzyme 5#
tnfn1_pw060328p06q125 FTN_0496 slt soluble lytic murein transglycosylase 3
tnfn1_pw060418p04q116 FTN_0512 glgX pullulanase 4
tnfn1_pw060510p03q154 FTN_0516 glgA glycogen synthase 7
tnfn1_pw060420p01q135 FTN_0540 pckA phosphoenolpyruvate carboxykinase 2
tnfn1_pw060419p04q153 FTN_0597 protein-disulfide isomerase 2
tnfn1_pw060510p02q110 FTN_0603 mutM formamidopyrimidine-DNA glycosylase 2
tnfn1_pw060328p02q139 FTN_0621 eno enolase (2-phosphoglycerate dehydratase) 2#
tnfn1_pw060510p03q188 FTN_0627 chiA chitinase, glycosyl hydrolase family 18 6
tnfn1_pw060418p01q120 FTN_0651 cdd cytidine deaminase 5#
tnfn1_pw060419p01q168 FTN_0651 cdd cytidine deaminase 2#
tnfn1_pw060328p04q151 FTN_0661 guaB IMP dehydrogenase/GMP reductase 6#
tnfn1_pw060328p06q131 FTN_0674 glxK glycerate kinase 3
tnfn1_pw060420p01q148 FTN_0694 nadB L-aspartate oxidase 4
tnfn1_pw060323p06q103 FTN_0711 predicted metal-dependent hydrolase 2
tnfn1_pw060328p04q116 FTN_0765 choloylglycine hydrolase family protein 2
tnfn1_pw060510p03q119 FTN_0806 glycosyl hydrolase family 3 3
tnfn1_pw060323p07q185 FTN_0814 bioF 8-amino-7-oxononanoate synthase 3#
tnfn1_pw060419p02q138 FTN_0814 bioF 8-amino-7-oxononanoate synthase 3#
tnfn1_pw060328p04q175 FTN_0818 lipase/esterase 5
tnfn1_pw060418p02q142 FTN_0826 aldo/keto reductase family protein 3
tnfn1_pw060328p08q145 FTN_0907 D-alanyl-D-alanine carboxypeptidase 4#
tnfn1_pw060418p04q131 FTN_0907 D-alanyl-D-alanine carboxypeptidase 4#
tnfn1_pw060418p04q167 FTN_0935 asnB asparagine synthase 2
tnfn1_pw060510p02q145 FTN_0945 rsuA 16S rRNA pseudouridine synthase 4
tnfn1_pw060328p08q120 FTN_0987 tRNA-dihydrouridine synthase 3#
tnfn1_pw060323p08q141 FTN_1015 isochorismatase family protein 3#
tnfn1_pw060420p01q129 FTN_1015 isochorismatase family protein 2#
tnfn1_pw060323p05q141 FTN_1033 grxB glutaredoxin 2 3#
tnfn1_pw060420p01q193 FTN_1033 grxB glutaredoxin 2 4#
tnfn1_pw060418p01q153 FTN_1055 lon DNA-binding, ATP-dependent protease La 2
tnfn1_pw060328p06q184 FTN_1061 acid phosphatase, HAD superfamily protein 3#
tnfn1_pw060420p02q103 FTN_1061 acid phosphatase, HAD superfamily protein 7#
tnfn1_pw060510p04q113 FTN_1121 phrB deoxyribodipyrimidine photolyase 6
tnfn1_pw060328p02q175 FTN_1131 putA bifunctional proline dehydrogenase, pyrroline-5-carboxylate dehydrogenase 4
tnfn1_pw060328p02q174 FTN_1135 aroB 3-dehydroquinate synthetase 5#
tnfn1_pw060328p08q131 FTN_1174 murI glutamate racemase 2#
tnfn1_pw060419p03q164 FTN_1186 pepO M13 family metallopeptidase 7
tnfn1_pw060418p01q124 FTN_1245 iscS cysteine desulfurase 7#
tnfn1_pw060323p04q139 FTN_1264 rluD ribosomal large subunit pseudouridine synthase D 2#
tnfn1_pw060510p03q183 FTN_1264 rluD ribosomal large subunit pseudouridine synthase D 6#
tnfn1_pw060328p06q166 FTN_1273 long chain fatty acid CoA ligase 2
tnfn1_pw060419p03q126 FTN_1278 nadE NAD synthase 5
tnfn1_pw060328p05q128 FTN_1329 fbaA fructose bisphosphate aldolase Class II 3
tnfn1_pw060323p06q195 FTN_1390 Zn-dependent hydrolase 5
tnfn1_pw060510p04q137 FTN_1425 wbtF NAD dependent epimerase 2
tnfn1_pw060419p03q166 FTN_1431 wbtA dTDP-glucose 4,6-dehydratase 2
tnfn1_pw060323p07q169 FTN_1438 bifunctional protein: 3-hydroxacyl-CoA dehydrogenase/acyl-CoA-binding protein 4#
tnfn1_pw060418p02q122 FTN_1438 bifunctional protein: 3-hydroxacyl-CoA dehydrogenase/acyl-CoA-binding protein 3#
tnfn1_pw060328p08q196 FTN_1459 short chain dehydrogenase 5
tnfn1_pw060328p06q128 FTN_1530 lysA diaminopimelate decarboxylase 6
tnfn1_pw060328p05q101 FTN_1532 gdhA glutamate dehydrogenase (NADP+) 2#
tnfn1_pw060419p04q163 FTN_1532 gdhA glutamate dehydrogenase (NADP+) 6#
tnfn1_pw060418p02q178 FTN_1536 amino acid-polyamine-organocation (APC) superfamily protein 4
tnfn1_pw060323p06q106 FTN_1552 acid phosphatase, PAP2 family 5
tnfn1_pw060510p01q118 FTN_1553 nudH dGTP pyrophosphohydrolase 2
tnfn1_pw060323p04q110 FTN_1678 nuoC NADH dehydrogenase I, C subunit 5#
tnfn1_pw060328p05q160 FTN_1729 dapB dihydrodipicolinate reductase 4#
tnfn1_pw060510p01q178 FTN_1729 dapB dihydrodipicolinate reductase 3#
tnfn1_pw060328p04q104 FTN_1730 lysC aspartate kinase III 2
tnfn1_pw060328p03q174 FTN_1768 pepN aminopeptidase N 3
Transporter proteins
tnfn1_pw060323p03q117 FTN_0005 corA divalent inorganic cation transporter 2#
tnfn1_pw060420p01q131 FTN_0005 corA divalent inorganic cation transporter 3#
tnfn1_pw060420p01q180 FTN_0097 hydroxy/aromatic amino acid permease (HAAAP) family protein 4#
tnfn1_pw060419p03q162 FTN_0115 Na+/H+ antiporter 4
tnfn1_pw060323p08q162 FTN_0151 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 2
tnfn1_pw060419p01q165 FTN_0183 manganese/Zinc/Iron chelate uptake transporter family protein 3#
tnfn1_pw060419p04q103 FTN_0183 manganese/Zinc/Iron chelate uptake transporter family protein 2#
tnfn1_pw060510p02q174 FTN_0184 major facilitator superfamily (MFS) transport protein 2
tnfn1_pw060323p03q161 FTN_0276 mviN multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter 2*
tnfn1_pw060510p02q151 FTN_0276 mviN multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) transporter 3*
tnfn1_pw060323p08q118 FTN_0345 DNA uptake protein, SMF family 2
tnfn1_pw060419p03q195 FTN_0363 sodium bile acid symporter family protein 4
tnfn1_pw060420p03q115 FTN_0566 mechanosensitive ion channel protein 3
tnfn1_pw060328p08q167 FTN_0579 major facilitator superfamily (MFS) transport protein 2
tnfn1_pw060419p04q167 FTN_0620 major facilitator superfamily (MFS) transport protein 5
tnfn1_pw060328p06q114 FTN_0631 metabolite:H+ symporter (MHS) family protein 2#
tnfn1_pw060510p02q115 FTN_0631 metabolite:H+ symporter (MHS) family protein 5#
tnfn1_pw060510p02q167 FTN_0631 metabolite:H+ symporter (MHS) family protein 5#
tnfn1_pw060418p02q189 FTN_0640 dctA C4-dicarboxylate transport protein 3
tnfn1_pw060510p02q159 FTN_0688 galP2 galactose-proton symporter, major facilitator superfamily (MFS) transport protein 3
tnfn1_pw060510p03q140 FTN_0741 proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter 5
tnfn1_pw060328p05q107 FTN_0767 betT betaine/carnitine/choline transporter (BCCT) family protein 4
tnfn1_pw060420p03q116 FTN_0824 major facilitator superfamily (MFS) transport protein 2
tnfn1_pw060510p04q173 FTN_0872 small conductance mechanosensitive ion channel (MscS) family protein 5
tnfn1_pw060328p06q175 FTN_0875 metabolite:H+ symporter (MHS) family 2
tnfn1_pw060328p02q106 FTN_0884 drug/metabolite transporter superfamily protein 1#
tnfn1_pw060328p03q163 FTN_0884 drug/metabolite transporter superfamily protein 4#
tnfn1_pw060328p01q188 FTN_0910 sugar:cation symporter family protein 2#
tnfn1_pw060419p04q109 FTN_0910 sugar:cation symporter family protein 2#
tnfn1_pw060419p01q175 FTN_0984 ABC transporter, ATP-binding protein 2
tnfn1_pw060419p01q170 FTN_1006 transporter-associated protein, HlyC/CorC family 4
tnfn1_pw060418p02q160 FTN_1010 major facilitator superfamily (MFS) transport protein 2
tnfn1_pw060419p01q133 FTN_1014 nicotinamide ribonucleoside (NR) uptake permease (PnuC) family protein 2
tnfn1_pw060328p02q109 FTN_1107 metlQ methionine uptake transporter (MUT) family protein, membrane and periplasmic protein 2
tnfn1_pw060323p05q139 FTN_1166 metabolite:H+ symporter (MHS) family protein 7
tnfn1_pw060419p02q107 FTN_1267 ATP-binding Cassette (ABC) superfamily protein 4
tnfn1_pw060418p02q182 FTN_1275 drug:H+ antiporter-1 (DHA2) family protein 5
tnfn1_pw060420p04q186 FTN_1404 ATP-binding cassette (ABC) superfamily protein 2
tnfn1_pw060510p02q118 FTN_1409 major facilitator superfamily (MFS) transport protein 6
tnfn1_pw060328p06q119 FTN_1549 drug:H+ antiporter-1 (DHA1) family protein 3
tnfn1_pw060419p02q126 FTN_1581 small conductance mechanosensitive ion channel (MscS) family protein 2
tnfn1_pw060418p01q150 FTN_1586 sugar transporter, MFS superfamily 2
tnfn1_pw060420p01q146 FTN_1681 fur ferric uptake regulation protein 2*
tnfn1_pw060510p04q167 FTN_1681 fur ferric uptake regulation protein 2*
tnfn1_pw060323p03q163 FTN_1683 drug:H+ antiporter-1 (DHA1) family protein 3*
tnfn1_pw060328p02q192 FTN_1683 drug:H+ antiporter-1 (DHA1) family protein 4*
tnfn1_pw060323p06q117 FTN_1685 drug:H+ antiporter-1 (DHA1) family protein 3
tnfn1_pw060418p02q140 FTN_1685 drug:H+ antiporter-1 (DHA1) family protein 5
tnfn1_pw060328p05q182 FTN_1707 nhaD Na+:H+ antiporter 5
tnfn1_pw060328p02q121 FTN_1716 kdpC potassium-transporting ATPase C chain 2*
tnfn1_pw060420p02q159 FTN_1716 kdpC potassium-transporting ATPase C chain 2*
tnfn1_pw060510p03q118 FTN_1717 kdpB potassium-transporting ATPase B chain 3
tnfn1_pw060420p01q113 FTN_1752 nhaA Na+:H+ antiporter 3
Transferase
tnfn1_pw060510p04q127 FTN_0071 LPS fatty acid acyltransferase 2#
tnfn1_pw060419p03q160 FTN_0080 SAM-dependent methyltransferase 4
tnfn1_pw060328p08q125 FTN_0120 rhodanese-related sulfurtransferase 4
tnfn1_pw060328p01q137 FTN_0153 RimI-like acetyltransferase 3
tnfn1_pw060418p01q110 FTN_0200 UDP-3-O-[3-fatty acid] glucosamine N-acyltransferase 2#
tnfn1_pw060510p02q131 FTN_0200 UDP-3-O-[3-fatty acid] glucosamine N-acyltransferase 2#
tnfn1_pw060420p02q146 FTN_0300 glycosyl transferase, group 2 5
tnfn1_pw060328p03q179 FTN_0358 tRNA-methylthiotransferase MiaB protein 4*
tnfn1_pw060419p01q169 FTN_0358 tRNA-methylthiotransferase MiaB protein 2*
tnfn1_pw060420p01q152 FTN_0453 glycosyl transferase 5
tnfn1_pw060419p02q135 FTN_0560 ksgA dimethyladenosine transferase 3
tnfn1_pw060419p04q168 FTN_1091 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 2
tnfn1_pw060418p03q185 FTN_1400 S-adenosylmethionine-dependent methyltransferase 5
tnfn1_pw060418p04q172 FTN_1418 manC mannose-1-phosphate guanylyltransferase 4
DNA Modification
tnfn1_pw060510p04q169 FTN_0122 recA recombinase A protein 2
tnfn1_pw060328p06q179 FTN_0492 parC DNA topoisomerase IV subunit A 2#
tnfn1_pw060510p04q168 FTN_0666 uvrA excinuclease ABC, subunit A 2
FTN_0704 type I restriction-modification system, subunit M (methyltransferase) 5
tnfn1_pw060510p02q180 FTN_0704 type I restriction-modification system, subunit M (methyltransferase) 2
tnfn1_pw060510p03q158 FTN_1294 rRNA methylase, SpoU family 2
tnfn1_pw060510p02q176 FTN_1413 ATPase, AAA family, related to the helicase subunit of the Holliday junction resolvase 2
tnfn1_pw060328p08q179 FTN_1491 adenine specific DNA methylase 2
tnfn1_pw060328p06q176 FTN_1544 hemK modification methylase, HemK family 5
tnfn1_pw060328p05q164 FTN_1594 uvrD DNA helicase II 6
Cell Division
tnfn1_pw060328p01q167 FTN_0330 minD septum formation inhibitor-activating ATPase 2
tnfn1_pw060323p08q146 FTN_0331 minC septum formation inhibitor 4#
tnfn1_pw060420p02q170 FTN_0331 minC septum formation inhibitor 4#
Transcription/Translation
tnfn1_pw060328p06q196 FTN_0552 yhbY RNA-binding protein 5#
tnfn1_pw060510p03q150 FTN_0949 rplI 50S ribosomal protein L9 2
tnfn1_pw060328p06q170 FTN_1099 transcriptional regulator, LysR family 7
tnfn1_pw060419p03q165 FTN_1300 transcriptional regulator, LysR family 2
tnfn1_pw060328p02q148 FTN_1393 transcriptional regulator, ArsR family 3#
tnfn1_pw060418p01q138 FTN_1393 transcriptional regulator, ArsR family 2#
tnfn1_pw060419p02q151 FTN_1628 transcriptional regulator, LysR family 2#
tnfn1_pw060510p03q194 FTN_1628 transcriptional regulator, LysR family 2#
FPI
tnfn1_pw060328p01q144 FTN_1313 hypothetical protein 3
tnfn1_pw060323p03q179 FTN_1314 conserved hypothetical protein 1
tnfn1_pw060328p06q163 FTN_1315 protein of unknown function 5
tnfn1_pw060328p06q115 FTN_1322 iglC intracellular growth locus protein C 5
tnfn1_pw060419p04q108 FTN_1325 pdpD protein of unknown function 2
Type IV Pili
tnfn1_pw060418p04q123 FTN_0070 pilE Type IV pili, pilus assembly protein 3
tnfn1_pw060510p03q129 FTN_0070 pilE Type IV pili, pilus assembly protein 3
tnfn1_pw060323p06q179 FTN_0305 pilus assembly protein 4
tnfn1_pw060419p01q196 FTN_0414 Type IV pili, pilus assembly protein 2
tnfn1_pw060419p03q141 FTN_0664 fimT Type IV pili, pilus assembly protein 2
tnfn1_pw060328p05q146 FTN_0946 pilF Type IV pili, pilus assembly protein 5
tnfn1_pw060418p02q167 FTN_1137 pilQ Type IV pili secretin component 4
Others
tnfn1_pw060328p08q161 isftu1 isftu1 2
tnfn1_pw060323p03q115 isftu3 isftu3 1
tnfn1_pw060328p04q157 isftu2 isftu2 1
tnfn1_pw060510p02q150 isftu6 isftu6 2
tnfn1_pw060328p01q179 FTN_0010 phage terminase, small subunit 3
tnfn1_pw060328p08q114 FTN_0266 htpG chaperone Hsp90, heat shock protein HtpG 2
tnfn1_pw060328p04q152 FTN_0322 VacJ like lipoprotein 3#
tnfn1_pw060418p01q140 FTN_0322 VacJ like lipoprotein 2#
tnfn1_pw060328p08q155 FTN_0357 pal peptidoglycan-associated lipoprotein, OmpA family 4*
tnfn1_pw060419p01q158 FTN_0357 pal peptidoglycan-associated lipoprotein, OmpA family 2*
tnfn1_pw060510p02q122 FTN_0367 phage integrase 4
tnfn1_pw060328p08q132 FTN_0372 regulatory protein, AlpA family 4
tnfn1_pw060323p07q171 FTN_0585 cutC copper homeostasis protein CutC family protein 2
tnfn1_pw060328p06q127 FTN_0713 ostA2 organic solvent tolerance protein OstA 5#
tnfn1_pw060419p01q180 FTN_0713 ostA2 organic solvent tolerance protein OstA 4#
tnfn1_pw060323p06q105 FTN_0810 ROK family protein 4
tnfn1_pw060419p01q139 FTN_0836 kinase-like protein 2
tnfn1_pw060418p04q134 FTN_1051 hfq host factor I for bacteriophage Q beta replication 2
tnfn1_pw060420p03q121 FTN_1064 PhoH family protein, putative ATPase 4
tnfn1_pw060328p05q177 FTN_1192 chitin-binding protein 6
tnfn1_pw060419p04q183 FTN_1240 BolA family protein 4
tnfn1_pw060418p02q190 FTN_1242 DedA family protein 5
tnfn1_pw060419p01q120 FTN_1488 prophage maintenance system killer protein (DOC) 6
tnfn1_pw060419p01q135 FTN_1665 magnesium chelatase 2
tnfn1_pw060419p04q180 FTN_1682 frgA siderophore biosynthesis protein 5
tnfn1_pw060510p04q122 FTN_1698 Dam-replacing family protein 2
Intergenic
tnfn1_pw060418p01q125 intergenic 7
tnfn1_pw060323p06q165 intergenic 5
tnfn1_pw060323p08q117 intergenic 3
tnfn1_pw060328p05q195 intergenic 6
tnfn1_pw060419p01q148 intergenic 3
tnfn1_pw060420p03q148 intergenic 3
tnfn1_pw060420p01q164 intergenic 2
tnfn1_pw060510p02q127 intergenic 2
tnfn1_pw060328p08q109 intergenic 2
tnfn1_pw060510p04q116 intergenic 2
#

Mutants for which all the mutant alleles showed similar growth defect

*

Mutants for which two out of three or three out of four alleles showed growth defect