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. Author manuscript; available in PMC: 2011 Nov 5.
Published in final edited form as: J Mol Biol. 2010 Sep 21;403(4):505–515. doi: 10.1016/j.jmb.2010.09.014

Table 1.

DNA substrates

F-DNAa 5′–CGCAGCCGTCCAACCAACTCAG GTCGATCCAATGCCGTCC–3′
3′–GCGTCGGCAGGTTGGTTGAGTCFCAGCTAGGTTACGGCAGG–5′
D-DNAb 5′–CGCAGCCGTCCAACCAACTCA CGTCGATCCAATGCCGTCC–3′
3′–GCGTCGGCAGGTTGGTTGAGTXGCAGCTAGGTTACGGCAGG–5′
a

The ‘F’ in the 41mer template represents 2-aminopurine. The downstream 18-mer is 5′-phosphorylated.

b

The ‘X’ in the 41mer template represents dA for D-1 DNA and dT for D-7 DNA. The downstream 19-mer is 5′-phosphorylated.