Table 3.
Association of SNPs in BCHE with cholinesterase activity.
SNP | Positiona | HWE p-value | MAF | Unadjusted p-values |
FDR p-values (dominant) | |||
---|---|---|---|---|---|---|---|---|
General | Additive | Dominant | Recessive | |||||
rs1803274 | 166,973,974 | 0.59 | 0.1 | 0.24 | 0.092 | 0.10 | 0.48 | — |
rs2668207b | 166,976,418 | 0.4 | 0.34 | 0.0044 | 0.0048 | 0.00098 | 0.51 | 0.15 |
rs2686409 | 166,978,094 | 0.5 | 0.14 | 0.032 | 0.016 | 0.052 | 0.025 | — |
rs3863086 | 166,983,379 | 1 | 0.013 | ND | 0.55 | 0.55 | ND | — |
rs2668196 | 166,985,403 | 0.78 | 0.27 | 0.0073 | 0.016 | 0.0023 | 0.93 | 0.18 |
rs1355538 | 166,987,871 | 0.21 | 0.38 | 0.0088 | 0.017 | 0.0023 | 0.53 | 0.18 |
rs4680662 | 166,999,244 | 0.65 | 0.27 | 0.012 | 0.022 | 0.0039 | 0.93 | 0.24 |
rs12487357 | 167,004,510 | 0.67 | 0.21 | 0.17 | 0.15 | 0.075 | 0.88 | — |
rs4680663 | 167,015,102 | 1 | 0.036 | ND | 0.058 | 0.058 | ND | — |
rs2048493b | 167,026,996 | 0.5 | 0.34 | 0.0026 | 0.0011 | 0.00068 | 0.12 | 0.15 |
rs4680607 | 167,036,281 | 0.9 | 0.1 | 0.021 | 0.027 | 0.088 | 0.011 | — |
rs1126680 | 167,037,819 | 1 | 0.015 | ND | 0.45 | 0.45 | ND | — |
Abbreviations: MAF, minor allele frequency; NCBI, National Center for Biotechnology Information; ND, cell values were too small for p-values to be determined.
Nucleotide position is based on chromosome 3, NCBI Build 36 (http://www.ncbi.nlm.nih.gov/).
SNPs with strongest observed association.