Table 4.
Genetic diversity estimates in the fruitless C3 exon and intron.
| Species | N | h |
Hd (SD) |
S | Sy | NSy | sg | m3 |
π (SD) |
πs (SD) |
πa (SD) |
θ (SD) |
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A. fraterculus | 37 | 36 | 0.998 (0.007) |
82 | 42 | 34 | 78 | 4 | 0.011 (0.0005) |
0.027 (0.0021) |
0.006 (0.0010) |
0.028 (0.009) |
|
| Exon | A. obliqua | 41 | 40 | 0.999 (0.006) |
80 | 41 | 39 | 77 | 3 | 0.013 (0.0005) |
0.026 (0.0020) |
0.008 (0.0007) |
0.027 (0.008) |
| A. sororcula | 19 | 19 | 1.000 (0.017) |
62 | 39 | 26 | 60 | 2 | 0.014 (0.0005) |
0.034 (0.0031) |
0.007 (0.0011) |
0.025 (0.009) |
|
| Anastrepha sp. | 97 | 94 | 0.999 (0.002) |
167 | 83 | 78 | 157 | 9 | 0.013 (0.0005) |
0.030 (0.0015) |
0.007 (0.0004) |
0.047 (0.009) |
|
| A. fraterculus | 37 | 22 | 0.922 (0.030) |
17 | - | - | 17 | 0 | 0.027 (0.0022) |
- | - | 0.057 (0.021) |
|
| Intron | A. obliqua | 41 | 11 | 0.429 (0.097) |
8 | - | - | 8 | 0 | 0.009 (0.0024) |
- | - | 0.026 (0.012) |
| A. sororcula | 19 | 13 | 0.936 (0.037) |
16 | - | - | 15 | 1 | 0.039 (0.0058) |
- | - | 0.064 (0.026) |
|
| Anastrepha sp. | 97 | 38 | 0.834 (0.032) |
28 | - | - | 22 | 6 | 0.026 (0.0022) |
- | - | 0.077 (0.023) |
|
N = number of sequences; h = number of haplotypes; Hd = haplotype diversity; S = Number of polymorphic sites; Sy = number of synonymous changes; NSy = number of nonsynonymous changes; sg = singletons; m3 = sites with more than three variants; π = nucleotide diversity; πs = synonymous nucleotide diversity; πa = nonsynonymous nucleotide diversity; θ = Waterson's theta. SD = standard deviation.