Table 1. Results of kinetic measurements and analysis.
32 base hairpin capture probe | 16 base hairpin capture probe | ||||||
Temperature |
[Target]a |
k × [T0]b |
Ratec |
R2 |
k × [T0]b |
Ratec |
R2 |
25°C | 0.001 | 1.1 ± 0.2 | 0.23 ± 0.02 | 0.9250 | 0.53 ± 0.08 | 0.11 ± 0.02 | 0.9175 |
0.004 | 4.9 ± 1.0 | 1.1 ± 0.3 | 0.8882 | 2.2 ± 0.1 | 0.44 ± 0.07 | 0.8874 | |
0.016 | 19 ± 3 | 4.2 ± 1.2 | 0.9441 | 8.6 ± 1.3 | 1.7 ± 0.2 | 0.9414 | |
0.064 | 64 ± 9 | 14 ± 3 | 0.9633 | 53 ± 6 | 11 ± 1 | 0.9850 | |
45°C | 0.001 | 4.2 ± 1.0 | 0.90 ± 0.09 | 0.9820 | 1.7 ± 0.2 | 0.33 ± 0.05 | 0.8547 |
0.004 | 19 ± 4 | 4.0 ± 0.5 | 0.9796 | 6.1 ± 1.0 | 1.2 ± 0.2 | 0.8367 | |
0.016 | 70 ± 3 | 15 ± 1 | 0.9970 | 28 ± 4 | 5.6 0.5 | 0.9097 | |
0.064 | 270 ± 10 | 58 ± 3 | 0.9986 | 82 ± 8 | 17 ± 2 | 0.9854 | |
32 base linear capture probe | 16 base linear capture probe | ||||||
25°C | 0.001 | ND | ND | ND | 0.15 ± 0.03 | 0.048 ± 0.009 | 0.8764 |
0.004 | 1.8 ± 0.5 | 0.58 ± 0.03 | 0.8983 | 0.62 ± 0.08 | 0.20 ± 0.02 | 0.8983 | |
0.016 | 9.0 ± 3.0 | 2.8 ± 0.4 | 0.8158 | 2.6 ± 0.4 | 0.82 ± 0.08 | 0.9665 | |
0.064 | 23 ± 2 | 7.3 ± 0.8 | 0.9826 | 8.8 ± 0.9 | 2.8 ± 0.3 | 0.9690 | |
45°C | 0.001 | 1.0 ± 0.2 | 0.31 ± 0.05 | 0.9935 | 0.84 ± 0.2 | 0.27 0.05 | 0.7405 |
0.004 | 4.9 ± 1.1 | 1.5 ± 0.8 | 0.9743 | 2.1 ± 0.2 | 0.69 ± 0.1 | 0.8491 | |
0.016 | 18 ± 2 | 5.6 ± 2.9 | 0.9828 | 8.6 ± 0.9 | 2.8 ± 0.4 | 0.8856 | |
0.064 | 64 ± 11 | 20 ± 3 | 0.9854 | 26 ± 3 | 8.4 ± 0.8 | 0.9615 |
a10–8 M strands.
b10–9/s (k and [T0] were determined from fits to equation 6).
cEvaluated from k × [T0] × [P0], 10–12 M/s. See text for details.
ND, not determined.