Abstract
Chlorination of 3-fluoro-2-methylaniline with N-chlorosuccinimide gave one major regioisomer whose structure was determined by X-ray crystallography. The product was found to have cocrystallized with succinimide, giving the title compound, C7H7ClFN·C4H5NO2. The crystal structure is stabilized by N—H⋯O hydrogen-bonding and π–π stacking interactions with a centroid–centroid distance of 3.4501 (8) Å.
Related literature
For related literature, see: Lazar et al. (2004 ▶); Marterer et al. (2003 ▶); Nickson & Roche-Dolson (1985 ▶); Shapiro et al. (2006 ▶); Tukada & Mazaki (1997 ▶); Zanka & Kubota (1999 ▶); Görbitz (1999 ▶).
Experimental
Crystal data
C7H7ClFN·C4H5NO2
M r = 258.68
Triclinic,
a = 7.3853 (2) Å
b = 7.4390 (2) Å
c = 11.5571 (4) Å
α = 73.1036 (13)°
β = 85.9336 (12)°
γ = 71.3703 (14)°
V = 575.53 (3) Å3
Z = 2
Mo Kα radiation
μ = 0.34 mm−1
T = 120 K
0.75 × 0.44 × 0.41 mm
Data collection
Nonius KappaCCD diffractometer
Absorption correction: multi-scan (DENZO/SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.47, T max = 0.87
16689 measured reflections
2904 independent reflections
2610 reflections with I > 2σ(I)
R int = 0.033
Refinement
R[F 2 > 2σ(F 2)] = 0.032
wR(F 2) = 0.087
S = 0.88
2904 reflections
154 parameters
H-atom parameters constrained
Δρmax = 0.38 e Å−3
Δρmin = −0.37 e Å−3
Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: CAMERON (Watkin et al., 1996 ▶); software used to prepare material for publication: CRYSTALS.
Supplementary Material
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808018795/lh2642sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018795/lh2642Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| N12—H1⋯O16i | 0.85 | 2.11 | 2.945 (2) | 168 |
| N8—H9⋯O16i | 0.84 | 2.18 | 2.915 (2) | 147 |
| N8—H11⋯O17 | 0.88 | 2.17 | 3.030 (2) | 166 |
Symmetry code: (i)
.
Acknowledgments
We thank Dr Sarah F. Jenkinson, University of Oxford, for her assistance in the preparation of the manuscript.
supplementary crystallographic information
Comment
Chlorination of anilines with N-chlorosuccinimide (NCS) can provide access to poly-substituted aromatic compounds, useful as high-value synthetic intermediates (Lazar et al., 2004; Marterer et al., 2003; Nickson & Roche-Dolson, 1985; Shapiro et al., 2006; Zanka & Kubota, 1999). In the present example, treatment of 3-fluoro-2-methylaniline with NCS in polar solvents (e.g. N,N-dimethylformamide) resulted in chlorination para to the NH2 as the primary regioisomer in 10-fold excess relative to the undesired ortho isomer.
The sample was supplied in the form of large crystalline aggregates (4 mm across) coated with perfluoropolyether oil as a preservative. A large (0.8x0.8x0.4 mm) section was cut from the mass. The material did not have a strong cleavage - the crystals just fractured erratically. Because of the risk that further cutting might totally destroy the sample, an initial X-ray data set was measured from this large sample. The results confirmed the expected structure, but also showed a co-crystallized molecule of succinimide (Tukada & Mazaki, 1997).
At the end of the initial data collection, the sample was further subdivided into an irregular block approximately 0.41x0.44x0.75 mm. Prescans showed that the further cutting of the crystal had introduced fractures, but the sample was still amenable to analysis. Because of the degraded quality of the crystal, a data set with a target redundancy of 3 (as opposed to the usual 1) was collected. This highly redundant dataset would enable corrections to be made for the poor crystal quality.
Structure solution was slightly complicated because of the unexpected succinimide, but after that refinement and the location of all hydrogen atoms was normal. The two components are shown in Fig. 1. Fig. 2 shows the plane-to-plane alternate stacking of the components, with minimum inter-planar spacing of 3.37Å - presumable π - π stacking. The columns of molecules are interconnected by N-H···O hydrogen bonds which form discreet centrosymmetric 4-component clusters (Fig. 3).
Experimental
3-Fluoro-2-methylaniline (550 mg, 4.40 mmol) was dissolved in N,N-dimethylformamide (DMF), N,N-dimethylacetamide (DMA) or 1-methyl-2-pyrrolidinone (NMP) (5 ml) and cooled to 0–5°C under argon. N-Chlorosuccinimide (586 mg, 4.39 mmol) was added and the mixture was allowed to warm to room temperature over 15 h (Fig. 4). Dilution with ethyl acetate, washing with water, drying (sodium sulfate), filtration and evaporation of the solvents gave a crude oil.
Crystals were grown from isopropyl ether by seeding and storing at 4°C for two weeks. The solvent was decanted and the crystals coated with 2 drops of FOMBLIN perfluoropolyether oil.
Additional methods of characterization were recorded: m.p. 75.5–76.0°C; 1H (400 MHz, d3-MeCN): δ = 2.04 (3H, d, J 2.0 Hz, CH3), 2.62 (4H, s, CH2CH2), 4.32 (2H, br-s, NH2), 6.46 (1H, dd, J 8.6 Hz, J 0.8 Hz), 7.00 (1H, a-t, J 8.6 Hz), 8.83 (1H, br-s, NH). 13C (100 MHz, d3-MeCN): δ = 9.12, 9.18 (CH3), 30.26 (CH2CH2), 107.99, 108.19 (C-2), 111.16 (C-6), 111.34, 111.37 (C-4), 127.97, 127.98 (C-3), 147.76, 147.82 (C-5), 156.09, 158.47 (C-1), 179.33 (2 xC=O) (using crystallographic numbering).
Refinement
The relatively large ratio of minimum to maximum corrections applied in the multiscan process (1:1.85) reflect the poor quality of the sample.
Difficulties in selecting an integration box suitable for all frames were taken into account (Görbitz, 1999) by the multi-scan inter-frame scaling (DENZO/SCALEPACK, Otwinowski & Minor, 1997).
The H atoms were all located in a difference map, but those attached to carbon atoms were repositioned geometrically. The H atoms were initially refined with soft restraints on the bond lengths and angles to regularize their geometry (C—H in the range 0.93–0.98, N—H in the range 0.86–0.89 N—H to 0.86 Å) and Uiso(H) (in the range 1.2–1.5 times Ueq of the parent atom), after which the positions were refined with riding constraints.
Figures
Fig. 1.
The title compound with displacement ellipsoids drawn at the 50% probability level. H atoms are shown as spheres of arbitary radius.
Fig. 2.
Plane-to-plane stacking of alternate molecules parallel to the a axis.
Fig. 3.
The hydrogen bonds (dotted lines) in the π -π stacks.
Fig. 4.
Synthetic scheme.
Crystal data
| C7H7ClFN·C4H5NO2 | Z = 2 |
| Mr = 258.68 | F000 = 268 |
| Triclinic, P1 | Dx = 1.493 Mg m−3 |
| a = 7.3853 (2) Å | Mo Kα radiation λ = 0.71073 Å |
| b = 7.4390 (2) Å | Cell parameters from 2870 reflections |
| c = 11.5571 (4) Å | θ = 5–29º |
| α = 73.1036 (13)º | µ = 0.34 mm−1 |
| β = 85.9336 (12)º | T = 120 K |
| γ = 71.3703 (14)º | Plate, colourless |
| V = 575.53 (3) Å3 | 0.75 × 0.44 × 0.41 mm |
Data collection
| Nonius KappaCCD diffractometer | 2610 reflections with I > 2σ(I) |
| Monochromator: graphite | Rint = 0.033 |
| T = 120 K | θmax = 28.7º |
| ω scans | θmin = 5.4º |
| Absorption correction: multi-scan(DENZO/SCALEPACK; Otwinowski & Minor, 1997) | h = −9→9 |
| Tmin = 0.47, Tmax = 0.87 | k = −10→9 |
| 16689 measured reflections | l = −15→15 |
| 2904 independent reflections |
Refinement
| Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| R[F2 > 2σ(F2)] = 0.032 | Method = Modified Sheldrick w = 1/[σ2(F2) + (0.05P)2 + 0.35P], where P = [max(Fo2,0) + 2Fc2]/3 |
| wR(F2) = 0.087 | (Δ/σ)max = 0.001 |
| S = 0.88 | Δρmax = 0.38 e Å−3 |
| 2904 reflections | Δρmin = −0.37 e Å−3 |
| 154 parameters | Extinction correction: None |
| Primary atom site location: structure-invariant direct methods |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| C11 | 0.94307 (16) | 0.30918 (17) | 0.66142 (11) | 0.0207 | |
| N12 | 0.99166 (15) | 0.16670 (15) | 0.59934 (9) | 0.0223 | |
| C13 | 1.10284 (16) | −0.01507 (17) | 0.66627 (11) | 0.0205 | |
| C14 | 1.14595 (16) | −0.00013 (17) | 0.78815 (10) | 0.0204 | |
| C15 | 1.04097 (16) | 0.21516 (17) | 0.78494 (11) | 0.0211 | |
| O16 | 1.15499 (13) | −0.16202 (13) | 0.62979 (8) | 0.0275 | |
| O17 | 0.83954 (13) | 0.47656 (13) | 0.62086 (8) | 0.0280 | |
| H141 | 1.2797 | −0.0325 | 0.7987 | 0.0245* | |
| H142 | 1.0987 | −0.0916 | 0.8511 | 0.0240* | |
| H151 | 1.1221 | 0.2859 | 0.7939 | 0.0258* | |
| H152 | 0.9471 | 0.2271 | 0.8474 | 0.0263* | |
| H1 | 0.9510 | 0.1824 | 0.5287 | 0.0265* | |
| C1 | 0.34402 (16) | 0.96277 (18) | 0.14329 (10) | 0.0201 | |
| C2 | 0.28607 (16) | 1.11710 (17) | 0.19551 (11) | 0.0207 | |
| C3 | 0.34232 (16) | 1.08204 (17) | 0.31427 (11) | 0.0217 | |
| C4 | 0.45586 (16) | 0.89539 (17) | 0.37673 (10) | 0.0210 | |
| C5 | 0.51642 (16) | 0.74038 (17) | 0.32214 (10) | 0.0188 | |
| C6 | 0.45694 (16) | 0.77380 (17) | 0.20237 (10) | 0.0194 | |
| C7 | 0.51289 (19) | 0.60873 (19) | 0.14308 (12) | 0.0269 | |
| N8 | 0.63360 (16) | 0.55949 (16) | 0.38422 (10) | 0.0277 | |
| Cl9 | 0.14163 (4) | 1.34735 (4) | 0.11329 (3) | 0.0293 | |
| F10 | 0.28435 (11) | 0.99849 (12) | 0.02806 (6) | 0.0291 | |
| H31 | 0.3012 | 1.1851 | 0.3475 | 0.0277* | |
| H41 | 0.4953 | 0.8705 | 0.4581 | 0.0257* | |
| H71 | 0.6503 | 0.5518 | 0.1414 | 0.0420* | |
| H72 | 0.4641 | 0.5027 | 0.1863 | 0.0416* | |
| H73 | 0.4639 | 0.6536 | 0.0618 | 0.0429* | |
| H9 | 0.6698 | 0.4664 | 0.3519 | 0.0324* | |
| H11 | 0.6736 | 0.5392 | 0.4585 | 0.0317* |
Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C11 | 0.0199 (5) | 0.0202 (5) | 0.0235 (6) | −0.0059 (4) | 0.0007 (4) | −0.0088 (4) |
| N12 | 0.0264 (5) | 0.0201 (5) | 0.0187 (5) | −0.0024 (4) | −0.0048 (4) | −0.0072 (4) |
| C13 | 0.0196 (5) | 0.0201 (5) | 0.0209 (5) | −0.0039 (4) | −0.0013 (4) | −0.0064 (4) |
| C14 | 0.0196 (5) | 0.0216 (5) | 0.0195 (5) | −0.0049 (4) | −0.0029 (4) | −0.0061 (4) |
| C15 | 0.0198 (5) | 0.0232 (5) | 0.0221 (6) | −0.0066 (4) | −0.0014 (4) | −0.0090 (4) |
| O16 | 0.0325 (5) | 0.0212 (4) | 0.0259 (5) | 0.0005 (4) | −0.0056 (4) | −0.0108 (4) |
| O17 | 0.0302 (5) | 0.0206 (4) | 0.0305 (5) | −0.0012 (3) | −0.0058 (4) | −0.0090 (4) |
| C1 | 0.0196 (5) | 0.0262 (6) | 0.0156 (5) | −0.0089 (4) | −0.0015 (4) | −0.0051 (4) |
| C2 | 0.0180 (5) | 0.0187 (5) | 0.0228 (6) | −0.0049 (4) | −0.0023 (4) | −0.0023 (4) |
| C3 | 0.0217 (5) | 0.0206 (5) | 0.0237 (6) | −0.0051 (4) | 0.0005 (4) | −0.0094 (4) |
| C4 | 0.0213 (5) | 0.0228 (5) | 0.0184 (5) | −0.0043 (4) | −0.0026 (4) | −0.0074 (4) |
| C5 | 0.0165 (5) | 0.0190 (5) | 0.0196 (5) | −0.0041 (4) | 0.0003 (4) | −0.0050 (4) |
| C6 | 0.0181 (5) | 0.0218 (5) | 0.0205 (5) | −0.0081 (4) | 0.0020 (4) | −0.0077 (4) |
| C7 | 0.0290 (6) | 0.0277 (6) | 0.0276 (6) | −0.0077 (5) | 0.0010 (5) | −0.0144 (5) |
| N8 | 0.0317 (6) | 0.0207 (5) | 0.0241 (5) | 0.0027 (4) | −0.0051 (4) | −0.0071 (4) |
| Cl9 | 0.02920 (17) | 0.02088 (16) | 0.03136 (17) | −0.00375 (11) | −0.00674 (12) | −0.00040 (11) |
| F10 | 0.0341 (4) | 0.0346 (4) | 0.0175 (3) | −0.0092 (3) | −0.0072 (3) | −0.0055 (3) |
Geometric parameters (Å, °)
| C11—N12 | 1.3890 (14) | C2—C3 | 1.3885 (17) |
| C11—C15 | 1.5141 (16) | C2—Cl9 | 1.7335 (12) |
| C11—O17 | 1.2075 (14) | C3—C4 | 1.3826 (16) |
| N12—C13 | 1.3689 (15) | C3—H31 | 0.913 |
| N12—H1 | 0.852 | C4—C5 | 1.4075 (16) |
| C13—C14 | 1.5082 (16) | C4—H41 | 0.952 |
| C13—O16 | 1.2235 (14) | C5—C6 | 1.4096 (16) |
| C14—C15 | 1.5309 (16) | C5—N8 | 1.3629 (14) |
| C14—H141 | 0.947 | C6—C7 | 1.5076 (16) |
| C14—H142 | 0.970 | C7—H71 | 0.968 |
| C15—H151 | 0.943 | C7—H72 | 0.963 |
| C15—H152 | 0.968 | C7—H73 | 0.955 |
| C1—C2 | 1.3848 (17) | N8—H9 | 0.842 |
| C1—C6 | 1.3826 (16) | N8—H11 | 0.882 |
| C1—F10 | 1.3569 (13) | ||
| N12—C11—C15 | 107.80 (9) | C1—C2—C3 | 118.84 (11) |
| N12—C11—O17 | 124.27 (11) | C1—C2—Cl9 | 119.74 (9) |
| C15—C11—O17 | 127.93 (11) | C3—C2—Cl9 | 121.41 (9) |
| C11—N12—C13 | 113.60 (10) | C2—C3—C4 | 119.37 (11) |
| C11—N12—H1 | 125.7 | C2—C3—H31 | 117.6 |
| C13—N12—H1 | 120.5 | C4—C3—H31 | 123.1 |
| N12—C13—C14 | 108.74 (9) | C3—C4—C5 | 121.32 (11) |
| N12—C13—O16 | 123.80 (11) | C3—C4—H41 | 119.8 |
| C14—C13—O16 | 127.46 (11) | C5—C4—H41 | 118.9 |
| C13—C14—C15 | 104.82 (9) | C4—C5—C6 | 119.65 (11) |
| C13—C14—H141 | 109.5 | C4—C5—N8 | 120.21 (11) |
| C15—C14—H141 | 111.9 | C6—C5—N8 | 120.13 (10) |
| C13—C14—H142 | 109.2 | C5—C6—C1 | 117.02 (10) |
| C15—C14—H142 | 111.7 | C5—C6—C7 | 120.92 (11) |
| H141—C14—H142 | 109.5 | C1—C6—C7 | 122.05 (11) |
| C14—C15—C11 | 104.97 (9) | C6—C7—H71 | 111.7 |
| C14—C15—H151 | 114.0 | C6—C7—H72 | 111.2 |
| C11—C15—H151 | 109.0 | H71—C7—H72 | 106.7 |
| C14—C15—H152 | 112.8 | C6—C7—H73 | 111.5 |
| C11—C15—H152 | 109.9 | H71—C7—H73 | 108.1 |
| H151—C15—H152 | 106.2 | H72—C7—H73 | 107.4 |
| C2—C1—C6 | 123.78 (11) | C5—N8—H9 | 120.4 |
| C2—C1—F10 | 118.07 (10) | C5—N8—H11 | 120.3 |
| C6—C1—F10 | 118.14 (10) | H9—N8—H11 | 119.3 |
Hydrogen-bond geometry (Å, °)
| D—H···A | D—H | H···A | D···A | D—H···A |
| N12—H1···O16i | 0.85 | 2.11 | 2.945 (2) | 168 |
| N8—H9···O16i | 0.84 | 2.18 | 2.915 (2) | 147 |
| N8—H11···O17 | 0.88 | 2.17 | 3.030 (2) | 166 |
Symmetry codes: (i) −x+2, −y, −z+1.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: LH2642).
References
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808018795/lh2642sup1.cif
Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018795/lh2642Isup2.hkl
Additional supplementary materials: crystallographic information; 3D view; checkCIF report




