Cluster 1 |
|
|
|
|
Sep1 |
Staphylococcus epidermidis RP62A |
565 |
Firmicutes |
57865830 |
Esp2 |
Exiguobacterium sp. AT1b |
585 |
Firmicutes |
187604364 |
Lsp2 |
Lysinibacillus sphaericus C3-41 |
586 |
Firmicutes |
169828142 |
Lpl1 |
Lactobacillus plantarum WCFS1 |
576 |
Firmicutes |
54307196 |
Sdy1 |
Streptococcus dysgalactiae subsp. equisimilis |
580 |
Firmicutes |
157419736 |
Lla1 |
Lactococcus lactis subsp. cremoris MG1363 |
571 |
Firmicutes |
125624073 |
Hin1 |
Haemophilus influenzae PittHH |
597 |
γ
|
145636206 |
Ahy1 |
Anaerococcus hydrogenalis DSM 7454 |
580 |
Firmicutes |
212696774 |
Bth1 |
Bacteroides thetaiotaomicron VPI-5482 |
570 |
Bacteroidetes |
29345526 |
Bco1 |
Bacillus coagulans 36D1 |
590 |
Firmicutes |
124520553 |
Swo1 |
Syntrophomonas wolfei subsp. wolfei str. Goettingen |
583 |
Firmicutes |
114566470 |
Cte6 |
Clostridium tetani E88 |
589 |
Firmicutes |
28211528 |
Cph2 |
Clostridium phytofermentans ISDg |
582 |
Firmicutes |
160880289 |
Dha1 |
Desulfitobacterium hafniense Y51 |
598 |
Firmicutes |
89897344 |
Aor1 |
Alkaliphilus oremlandii OhILAs |
582 |
Firmicutes |
158320145 |
Cbe1 |
Clostridium beijerinckii NCIMB 8052 |
582 |
Firmicutes |
150016979 |
Bse1 |
Bacillus selenitireducens MLS10 |
587 |
Firmicutes |
163763208 |
Bce2 |
Bacillus cereus ATCC 10987 |
586 |
Firmicutes |
44004495 |
Bsp2 |
Bacillus sp. SG-1 |
594 |
Firmicutes |
149180106 |
Gur1 |
Geobacter uraniireducens Rf4 |
583 |
δ
|
148263449 |
Bph1 |
Burkholderia phytofirmans PsJN |
584 |
β
|
187925677 |
Mma1 |
Magnetospirillum magnetotacticum MS-1 |
574 |
α
|
46201533 |
Rru1 |
Rhodospirillum rubrum ATCC 11170 |
571 |
α
|
83592783 |
Bvi1 |
Burkholderia vietnamiensis G4 |
587 |
β
|
134293367 |
Asp4 |
Azoarcus sp. BH72 |
582 |
β
|
119898647 |
Rba1 |
Rhodopirellula baltica SH 1 |
593 |
Planctomycetes |
32475953 |
Aeh2 |
Alkalilimnicola ehrlichei MLHE-1 |
571 |
γ
|
114321857 |
Orf3 |
delta proteobacterium MLMS-1 |
592 |
δ
|
94266138 |
Vba1 |
Verrucomicrobiae bacterium DG1235 |
584 |
Verrucomicrobia |
198257295 |
Vha1 |
Vibrio harveyi ATCC BAA-1116 |
582 |
γ
|
156973785 |
Sty1 |
Salmonella typhimurium |
585 |
γ
|
32470159 |
Ahy2 |
Aeromonas hydrophila subsp. hydrophila ATCC 7966 |
599 |
γ
|
117618702 |
Ppr1 |
Photobacterium profundum SS9 |
590 |
γ
|
54308735 |
Psp1 |
Psychromonas sp. CNPT3 |
602 |
γ
|
90408036 |
Cfe1 |
Chlorobium ferrooxidans DSM 13031 |
591 |
Chlorobi |
110598505 |
Psp2 |
Pseudomonas sp. TS44 |
585 |
γ
|
170026534 |
Rfe1 |
Rhodoferax ferrireducens T118 |
589 |
β
|
89902424 |
Dar1 |
Dechloromonas aromatica RCB |
590 |
β
|
71908250 |
Afa1 |
Alcaligenes faecalis |
591 |
β
|
42741719 |
Pae1 |
Pseudomonas aeruginosa |
588 |
γ
|
187939925 |
Sen1 |
Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 |
586 |
γ
|
167553198 |
Aar1 |
Aromatoleum aromaticum EbN1 |
592 |
β
|
56478279 |
Aca1 |
Acidithiobacillus caldus |
612 |
γ
|
60686969 |
Otr1 |
Ochrobactrum tritici |
582 |
α
|
94483089 |
Pst2 |
Providencia stuartii ATCC 25827 |
594 |
γ
|
188026271 |
Ssp2 |
Shewanella sp. ANA-3 |
588 |
γ
|
117920786 |
Yin1 |
Yersinia intermedia ATCC 29909 |
586 |
γ
|
77979455 |
Asp1 |
Arthrobacter sp. FB24 |
621 |
Actinobacteria |
116668777 |
Mgi1 |
Mycobacterium gilvum PYR-GCK |
589 |
Actinobacteria |
145222246 |
Rer1 |
Rhodococcus erythropolis |
585 |
Actinobacteria |
33867198 |
Rle1 |
Rhizobium leguminosarum bv. viciae 3841 |
588 |
α
|
116254241 |
Pna1 |
Polaromonas naphthalenivorans CJ2 |
600 |
β
|
121606619 |
Asp2 |
Acidovorax sp. JS42 |
586 |
β
|
121594853 |
Hla2 |
Halorubrum lacusprofundi ATCC 49239 |
640 |
Euryarchaeota |
153896608 |
Hsp4 |
Halobacterium sp. NRC-1 |
644 |
Euryarchaeota |
10803670 |
|
Cluster 2 |
|
|
|
|
Mka1 |
Methanopyrus kandleri AV19 |
333 |
Euryarchaeota |
20095116 |
Mst1 |
Methanosphaera stadtmanae DSM 3091 |
328 |
Euryarchaeota |
84488998 |
Msm1 |
Methanobrevibacter smithii ATCC 35061 |
340 |
Euryarchaeota |
148643230 |
Mth1 |
Methanothermobacter thermautotrophicus str. Delta H |
324 |
Euryarchaeota |
15679508 |
Mja1 |
Methanocaldococcus jannaschii DSM 2661 |
349 |
Euryarchaeota |
15669329 |
Mma2 |
Methanococcus maripaludis S2 |
345 |
Euryarchaeota |
45357726 |
Mae2 |
Methanococcus aeolicus Nankai-3 |
341 |
Euryarchaeota |
150401428 |
|
Cluster 3 |
|
|
|
|
Tva1 |
Trichomonas vaginalis G3 |
297 |
Trichomonada |
123416597 |
Tva2 |
Trichomonas vaginalis G3 |
292 |
Trichomonada |
123451254 |
Yli1 |
Yarrowia lipolytica CLIB122 |
327 |
Fungi |
50554649 |
Gze1 |
Gibberella zeae PH-1 |
341 |
Fungi |
46136751 |
Ani1 |
Aspergillus nidulans FGSC A4 |
340 |
Fungi |
67524903 |
Spo1 |
Schizosaccharomyces pombe |
329 |
Fungi |
19115182 |
Rgl1 |
Rhodotorula glutinis |
339 |
Fungi |
183396512 |
Uma1 |
Ustilago maydis 521 |
332 |
Fungi |
71019509 |
Cci1 |
Coprinopsis cinerea okayama7#130 |
326 |
Fungi |
169843560 |
Cne1 |
Cryptococcus neoformans var. neoformans JEC21 |
325 |
Fungi |
58260906 |
Cal1 |
Candida albicans SC5314 |
350 |
Fungi |
68468811 |
Sce1 |
Saccharomyces cerevisiae |
354 |
Fungi |
51013779 |
Tad1 |
Trichoplax adhaerens |
339 |
Metazoa |
196008131 |
Ppa2 |
Physcomitrella patens subsp. patens |
365 |
Viridiplantae |
168012492 |
Obr1 |
Oryza brachyantha |
364 |
Viridiplantae |
110430665 |
Ath2 |
Arabidopsis thaliana |
345 |
Viridiplantae |
8570442 |
Psi1 |
Picea sitchensis |
374 |
Viridiplantae |
116784166 |
Ddi1 |
Dictyostelium discoideum AX4 |
329 |
Amoebozoa |
66800287 |
Api1 |
Acyrthosiphon pisum |
339 |
Metazoa |
193582608 |
Dre1 |
Danio rerio |
341 |
Metazoa |
50539666 |
Nve1 |
Nematostella vectensis |
334 |
Metazoa |
156398556 |
Spu1 |
Strongylocentrotus purpuratus |
346 |
Metazoa |
72050675 |
Dan1 |
Drosophila ananassae |
336 |
Metazoa |
194755601 |
Nvi1 |
Nasonia vitripennis |
344 |
Metazoa |
156537421 |
Aae3 |
Aedes aegypti |
341 |
Metazoa |
157128460 |
Tca1 |
Tribolium castaneum |
330 |
Metazoa |
91081505 |
Cel1 |
Caenorhabditis elegans |
342 |
Metazoa |
17557003 |
Bma1 |
Brugia malayi |
344 |
Metazoa |
170590260 |
Pte1 |
Paramecium tetraurelia strain d4-2 |
325 |
Oligohymenophorea |
145545770 |
Tth1 |
Tetrahymena thermophila SB210 |
349 |
Oligohymenophorea |
118401519 |
Tcr1 |
Trypanosoma cruzi strain CL Brener |
359 |
Trypanosomatidae |
71401129 |
Lma1 |
Leishmania major strain Friedlin |
409 |
Trypanosomatidae |
157865666 |
Tpa1 |
Theileria parva strain Muguga |
361 |
Apicomplexa |
71027033 |
Bbo1 |
Babesia bovis T2Bo |
358 |
Apicomplexa |
156082722 |
Pbe1 |
Plasmodium berghei str. ANKA |
379 |
Apicomplexa |
68071753 |
Cmu1 |
Cryptosporidium muris RN66 |
390 |
Apicomplexa |
209879305 |
Cpa1 |
Cryptosporidium parvum Iowa II |
366 |
Apicomplexa |
126654216 |
Ehi1 |
Entamoeba histolytica HM-1:IMSS |
327 |
Amoebozoa |
67466277 |
Gla1 |
Giardia lamblia ATCC 50803 |
354 |
Hexamitidae |
159119999 |
|
Cluster 4 |
|
|
|
|
Gur2 |
Geobacter uraniireducens Rf4 |
637 |
δ
|
148264869 |
Ssp1 |
Synechococcus sp. JA-3-3Ab |
684 |
Cyanobacteria |
86605793 |
Mae1 |
Microcystis aeruginosa PCC 7806 |
633 |
Cyanobacteria |
159025965 |
Nsp2 |
Nostoc sp. PCC 7120 |
635 |
Cyanobacteria |
17229736 |
Nsp3 |
Nodularia spumigena CCY 9414 |
617 |
Cyanobacteria |
119512417 |
Ama1 |
Arthrospira maxima CS-328 |
637 |
Cyanobacteria |
209527482 |
Ter2 |
Trichodesmium erythraeum IMS101 |
626 |
Cyanobacteria |
113475961 |
Npu1 |
Nostoc punctiforme PCC 73102 |
623 |
Cyanobacteria |
186682498 |
|
Cluster 5 |
|
|
|
|
Zma2 |
Zea mays |
374 |
Viridiplantae |
195625344 |
Ath3 |
Arabidopsis thaliana |
391 |
Viridiplantae |
30697424 |
Vvi1 |
Vitis vinifera |
422 |
Viridiplantae |
147852937 |
Ppa1 |
Physcomitrella patens subsp. patens |
359 |
Viridiplantae |
168024699 |
Zma1 |
Zea mays |
394 |
Viridiplantae |
195645964 |
Ath1 |
Arabidopsis thaliana |
411 |
Viridiplantae |
30681260 |
Vvi2 |
Vitis vinifera |
409 |
Viridiplantae |
157343988 |
Ptr1 |
Populus trichocarpa |
407 |
Viridiplantae |
118487322 |
Cre1 |
Chlamydomonas reinhardtii |
513 |
Viridiplantae |
159488560 |
Olu1 |
Ostreococcus lucimarinus CCE9901 |
330 |
Viridiplantae |
145350244 |
|
Cluster 6 |
|
|
|
|
Aba1 |
Acidobacteria bacterium Ellin345 |
634 |
Acidobacteria |
94969437 |
Mxa1 |
Myxococcus xanthus DK 1622 |
655 |
δ
|
108758691 |
|
Cluster 7 |
|
|
|
|
Hwa1 |
Haloquadratum walsbyi DSM 16790 |
312 |
Euryarchaeota |
110668350 |
Orf2 |
uncultured prokaryote 2E01B |
314 |
none |
85372676 |
Nph1 |
Natronomonas pharaonis DSM 2160 |
317 |
Euryarchaeota |
76801342 |
Nph2 |
Natronomonas pharaonis DSM 2160 |
370 |
Euryarchaeota |
76801234 |
Hsp2 |
Halobacterium sp. NRC-1 |
347 |
Euryarchaeota |
15789625 |
Hla3 |
Halorubrum lacusprofundi ATCC 49239 |
392 |
Euryarchaeota |
153895127 |
|
Cluster 8 |
|
|
|
|
Cth5 |
Chloroherpeton thalassium ATCC 35110 |
405 |
Chlorobi |
193215201 |
Cau4 |
Chloroflexus aurantiacus J-10-fl |
399 |
Chloroflexi |
163845724 |
Cte1 |
Chlorobium tepidum TLS |
395 |
Chlorobi |
21673808 |
Cth2 |
Chloroherpeton thalassium ATCC 35110 |
405 |
Chlorobi |
193214297 |
Pae2 |
Prosthecochloris aestuarii DSM 271 |
404 |
Chlorobi |
194332962 |
Cte3 |
Chlorobium tepidum TLS |
398 |
Chlorobi |
21672957 |
Plu2 |
Pelodictyon luteolum DSM 273 |
406 |
Chlorobi |
78185960 |
Cte2 |
Chlorobium tepidum TLS |
405 |
Chlorobi |
21674757 |
Cth4 |
Chloroherpeton thalassium ATCC 35110 |
402 |
Chlorobi |
193214011 |
Cau1 |
Chloroflexus aurantiacus J-10-fl |
390 |
Chloroflexi |
163846065 |
Dau1 |
Candidatus Desulforudis audaxviator MP104C |
397 |
Firmicutes |
169830523 |
Ame1 |
Alkaliphilus metalliredigens QYMF |
391 |
Firmicutes |
150389286 |
Bce1 |
Bacillus cereus ATCC 10987 |
392 |
Firmicutes |
42779427 |
Rxy1 |
Rubrobacter xylanophilus DSM 9941 |
394 |
Actinobacteria |
108804153 |
Pae3 |
Prosthecochloris aestuarii DSM 271 |
395 |
Chlorobi |
194333066 |
Cte4 |
Chlorobium tepidum TLS |
394 |
Chlorobi |
21674880 |
Cli1 |
Chlorobium limicola DSM 245 |
395 |
Chlorobi |
189347837 |
Sel1 |
Synechococcus elongatus PCC 7942 |
392 |
Cyanobacteria |
81300068 |
Gvi1 |
Gloeobacter violaceus PCC 7421 |
394 |
Cyanobacteria |
37520959 |
Adi1 |
Angiococcus disciformis |
405 |
δ
|
53747901 |
Hsp1 |
Hydrogenobaculum sp. Y04AAS1 |
397 |
Aquificae |
195953882 |
Aae2 |
Aquifex aeolicus VF5 |
396 |
Aquificae |
15606091 |
Hsp5 |
Hydrogenivirga sp. 128-5-R1-1 |
393 |
Aquificae |
163783049 |
Sus1 |
Solibacter usitatus Ellin6076 |
395 |
Acidobacteria |
116624985 |
Dal1 |
Desulfatibacillum alkenivorans AK-01 |
397 |
δ
|
163725491 |
Hau1 |
Herpetosiphon aurantiacus ATCC 23779 |
391 |
Chloroflexi |
159900394 |
Rsp1 |
Roseiflexus sp. RS-1 |
396 |
Chloroflexi |
148655082 |
Cau3 |
Chloroflexus aurantiacus J-10-fl |
401 |
Chloroflexi |
163848482 |
Cth3 |
Chloroherpeton thalassium ATCC 35110 |
383 |
Chlorobi |
193214006 |
Cte7 |
Chlorobium tepidum TLS |
384 |
Chlorobi |
21674751 |
|
Cluster 9 |
|
|
|
|
Mma4 |
Microscilla marina ATCC 23134 |
390 |
Bacteroidetes |
124004922 |
Pto1 |
Picrophilus torridus DSM 9790 |
386 |
Euryarchaeota |
48478270 |
Tac1 |
Thermoplasma acidophilum DSM 1728 |
387 |
Euryarchaeota |
16081559 |
Cph3 |
Clostridium phytofermentans ISDg |
385 |
Firmicutes |
160879841 |
Fnu2 |
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 |
388 |
Fusobacteria |
19704869 |
Cph1 |
Clostridium phytofermentans ISDg |
393 |
Firmicutes |
160879840 |
Fnu1 |
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 |
396 |
Fusobacteria |
19704870 |
|
Cluster 10 |
|
|
|
|
Nsp1 |
Nocardioides sp. JS614 |
410 |
Actinobacteria |
119717335 |
Jsp1 |
Janibacter sp. HTCC2649 |
421 |
Actinobacteria |
84496160 |
Ser1 |
Saccharopolyspora erythraea NRRL 2338 |
400 |
Actinobacteria |
134098280 |
Nfa1 |
Nocardia farcinica IFM 10152 |
436 |
Actinobacteria |
54023683 |
Mab1 |
Mycobacterium abscessus |
423 |
Actinobacteria |
169629069 |
Mle1 |
Mycobacterium leprae TN |
415 |
Actinobacteria |
15827412 |
Msp1 |
Mycobacterium sp. MCS |
421 |
Actinobacteria |
108800245 |
Msm2 |
Mycobacterium smegmatis str. MC2 155 |
425 |
Actinobacteria |
118471162 |
|
Cluster 11 |
|
|
|
|
Cth1 |
Chloroherpeton thalassium ATCC 35110 |
434 |
Chlorobi |
193214353 |
Cte5 |
Chlorobium tepidum TLS |
436 |
Chlorobi |
21673187 |
Cau2 |
Chloroflexus aurantiacus J-10-fl |
407 |
Chloroflexi |
163845728 |
Cth6 |
Candidatus Chloracidobacterium thermophilum |
420 |
Acidobacteria |
157273534 |
Cluster 12 |
|
|
|
|
Ter1 |
Trichodesmium erythraeum IMS101 |
364 |
Cyanobacteria |
113474690 |
Bba1 |
Bdellovibrio bacteriovorus HD100 |
357 |
δ
|
42525090 |
|
Cluster 13 |
|
|
|
|
Mmy1 |
Mycoplasma mycoides subsp. mycoides LC str. GM12 |
304 |
Tenericutes |
188159217 |
Esp1 |
Exiguobacterium sp. AT1b |
279 |
Firmicutes |
187605346 |
|
Cluster 14 |
|
|
|
|
Iho1 |
Ignicoccus hospitalis KIN4/I |
309 |
Crenarchaeota |
156938113 |
Sma1 |
Staphylothermus marinus F1 |
329 |
Crenarchaeota |
126465059 |
Tba1 |
Thermococcus barophilus MP |
330 |
Euryarchaeota |
197627410 |
Tko1 |
Thermococcus kodakarensis KOD1 |
331 |
Euryarchaeota |
57640929 |
Pab1 |
Pyrococcus abyssi GE5 |
330 |
Euryarchaeota |
14521447 |
Ton1 |
Thermococcus onnurineus NA1 |
330 |
Euryarchaeota |
212224056 |
|
Cluster 15 |
|
|
|
|
Par1 |
Pyrobaculum arsenaticum DSM 13514 |
334 |
Crenarchaeota |
145591126 |
Sth2 |
Symbiobacterium thermophilum IAM 14863 |
339 |
Firmicutes |
51891819 |
Par2 |
Pyrobaculum arsenaticum DSM 13514 |
327 |
Crenarchaeota |
145591125 |
Sth1 |
Symbiobacterium thermophilum IAM 14863 |
345 |
Firmicutes |
51891818 |
|
Cluster 16 |
|
|
|
|
Wsu1 |
Wolinella succinogenes DSM 1740 |
313 |
ε
|
34557874 |
Aae1 |
Aquifex aeolicus VF5 |
299 |
Aquificae |
15605857 |
Hsp3 |
Hydrogenivirga sp. 128-5-R1-1 |
306 |
Aquificae |
163782204 |
|
Cluster 17 |
|
|
|
|
Csa1 |
Chromohalobacter salexigens DSM 3043 |
313 |
γ
|
92114127 |
Bsp1 |
Bacillus sp. NRRL B-14911 |
328 |
Firmicutes |
89098562 |
Bha1 |
Bacillus halodurans C-125 |
313 |
Firmicutes |
15614358 |
Oih1 |
Oceanobacillus iheyensis HTE831 |
307 |
Firmicutes |
23098830 |
Hha1 |
Halorhodospira halophila SL1 |
311 |
γ
|
121998972 |
Aeh1 |
Alkalilimnicola ehrlichei MLHE-1 |
318 |
γ
|
114319474 |
Tfu1 |
Thermobifida fusca YX |
301 |
Actinobacteria |
72161795 |
Nmo1 |
Nitrococcus mobilis Nb-231 |
311 |
γ
|
88811608 |
Nph3 |
Natronomonas pharaonis DSM 2160 |
318 |
Euryarchaeota |
76801557 |
Hwa2 |
Haloquadratum walsbyi DSM 16790 |
327 |
Euryarchaeota |
110667012 |
Hla1 |
Halorubrum lacusprofundi ATCC 49239 |
341 |
Euryarchaeota |
153896540 |
Hma1 |
Haloarcula marismortui ATCC 43049 |
426 |
Euryarchaeota |
55379238 |
|
Cluster 18 |
|
|
|
|
Par3 |
Psychrobacter arcticus 273-4 |
339 |
γ
|
71065679 |
Psp3 |
Psychrobacter sp. PRwf-1 |
331 |
γ
|
148653012 |
Asp3 |
Alcanivorax sp. DG881 |
347 |
γ
|
196196123 |
Ilo1 |
Idiomarina loihiensis L2TR |
336 |
γ
|
56459808 |
Iba1 |
Idiomarina baltica OS145 |
338 |
γ
|
85712073 |
Pst1 |
Pseudomonas stutzeri A1501 |
335 |
γ
|
146280770 |
Bli1 |
Brevibacterium linens BL2 |
327 |
Actinobacteria |
62424272 |