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. 2010 Aug 18;285(43):33184–33196. doi: 10.1074/jbc.M110.154559

TABLE 3.

Structures selected as possible templates for a CW_ repeat by more than one method

Only the top 10 hits of each method were considered.

PDBa FUGUE
SP4
3D-PSSM
Template structure
Ranking Score Ranking Score Ranking Score
1ixs (a) 2 3.11 1 7.15 15 34.2 3-helical bundle
1gab 7 2.47 3 24.7 3-helical bundle
1ytf (b) 5 6.07 9 30.8 2-helix motif
1fse (a) 6 2.52 10 5.54 4-helical bundle

a The protein subunit is indicated in parentheses.