Table 1.
SIVs in competition | Ratio of inoc. titersb | Exp. no. | Dominant aa sequencesc | |||
---|---|---|---|---|---|---|
day 6 | day 18 | |||||
4:1 | #1 | 205D | 205D | |||
#2 | 205D | 205D | ||||
SIVmac239 & SIVmac239Gag205E | 1:1 | #1 | 205D | 205D | ||
#2 | 205D | 205D | ||||
1:4 | #1 | 205D | 205D | |||
#2 | 205D | 205D | ||||
4:1 | #1 | 205D | 312A | 205D | 312A | |
#2 | 205D | 312A | 205D | 312A | ||
SIVmac239 & SIVmac239Gag205E312P | 1:1 | #1 | 205D | 312A | 205D | 312A |
#2 | 205D | 312A | 205D | 312A | ||
1:4 | #1 | 205D | 312A | 205D | 312A | |
#2 | 205D | 312A | 205D | 312A | ||
4:1 | #1 | 205D | 340V | 205D | 340V | |
#2 | 205D | 340V | 205D | 340V | ||
SIVmac239 & SIVmac239Gag205E340M | 1:1 | #1 | 205D/E | 340V/M | 205E | 340M |
#2 | 205D/E | 340V/M | 205E | 340M | ||
1:4 | #1 | 205E | 340M | 205E | 340M | |
#2 | 205E | 340M | 205E | 340M | ||
4:1 | #1 | 205E | 312P | 205E | 312P | |
#2 | 205E | 312P | 205E | 312P | ||
SIVmac239Gag205E & SIVmac239Gag205E312P | 1:1 | #1 | 205E | 312P | 205E | 312P |
#2 | 205E | 312P | 205E | 312P | ||
1:4 | #1 | 205E | 312P | 205E | 312P | |
#2 | 205E | 312P | 205E | 312P | ||
4:1 | #1 | 205E | 340M | 205E | 340M | |
#2 | 205E | 340M | 205E | 340M | ||
SIVmac239Gag205E & SIVmac239Gag205E340M | 1:1 | #1 | 205E | 340M | 205E | 340M |
#2 | 205E | 340M | 205E | 340M | ||
1:4 | #1 | 205E | 340M | 205E | 340M | |
#2 | 205E | 340M | 205E | 340M |
aHSC-F cells were coinfected with two kinds of SIVs indicated. Viral gag fragments were amplified by RT-PCR from viral RNAs from the culture supernatants on days 6 and 18 postinfection and then sequenced. Results from two sets of experiments (Exp. #1 and #2) are shown.
bThe ratio of the dose (RT activity) of the virus indicated at the top to that at the bottom at coinfection.
cDominant amino acid sequences at the positions where mutations were included in the inoculums are shown. 205D/E, D and E were detected equally at the 205th aa in Gag; 340 V/M, V and M were detected equally at the 340th aa in Gag.