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. 2010 Sep;78(2-3):123–138. doi: 10.1016/j.tpb.2010.06.002

Table 1.

Glossary of symbols. For both the Roman and Greek alphabets, uppercase letters precede lowercase ones. For each uppercase or lowercase letter, listing is in order of appearance of the definition in the text. The references are to the equation closest to the definition of each symbol. Thus, (2.1), (2.1)+, (2.1)− refers to (2.1), the text below (2.1), the text above (2.1), respectively. Symbols that occur only in the Appendix are not listed.

Symbol Reference Definition
Ain(n) (2.1)- Allele at locus n
Aˆ (3.4)+ Region of attraction of ρˆ
b (5.17) (b1,,bΓ)T
bα (5.17)+ w¯ˆαnu22,α(n)
cα (2.1)- Proportion of zygotes in deme α
D (3.4)- Vector of all linkage disequilibria in an L-locus system
Di,α (3.4)- Linkage disequilibrium in gamete i in deme α
Dˆ (3.4)+ D evaluated at gene-frequency equilibrium
F (2.14) lnw˜
f (5.14)- (f(1),,f(L))T
f(n) (5.14) 2ϑ(n)p(n)+(12ϑ(n))(p(n))2
G (2.1)- Set of all demes
G(n) (2.17)- Covariance matrix for locus n
h (2.1)- Locus index
In (2.1)- Number of alleles at locus n
I (6.8)- Number of alleles at locus n if independent of n
in (2.1)- Allelic index at locus n
i (2.1)- Gamete (i1,,iL)
J (2.3)- Number of gametes
Jn (7.3)- Set of alleles present at equilibrium at locus n
j (2.1)- Index for gamete
jn (2.4)- Allelic index at locus n
k (2.1)- Index for gamete
L (2.1)- Number of loci
L (2.1)- Set of all loci
l (2.1)- Locus index
mα (6.7)+ Backward migration rate
n (2.1)- Locus index
O (7.3)+ Order symbol
pi (2.1)- Frequency of gamete i
pin(n) (2.1)- Frequency of allele Ain(n)
p (2.3)- Vector of gamete frequencies
pjhin(hn) (2.10) Frequency of gamete Ajh(h)Ain(n)
p(n) (2.17)- (p1(n),,pIn(n))T (only Section 2)
p(n) (5.1)- Frequency of allele A1(n) in the diallelic case
pˆ (3.4)+ p at gamete-frequency equilibrium
Ri,jk (2.1)+ Probability that gamete i is produced by haplotypes jk
RJ (2.3)- J-dimensional Euclidean space
rmin (3.8)+ Smallest two-locus recombination frequency
sα (6.2) Directional selection coefficient in deme α
sij,α (7.1) Epistasis coefficients
t (2.10)+ Time in generations
U (5.9)+ Open set of parameters
uinjn,α(n) (2.3)+ Fitness contribution of Ain(n)Ajn(n) in deme α
u¯α(n) (2.6) Mean fitness contribution of locus n in deme α
uin,α(n) (2.7) Marginal fitness contribution of Ain(n) in deme α
uin,α(n) (4.2a) Fitness contribution of Ain(n) in deme α (only Section 4)
V (5.10)- L×Γ matrix with entries Vnα
Vnα (5.10)- Entry of matrix V
Wjk (3.1) Averaged fitness of jk at gene-frequency equilibrium
W¯α(z) (5.15) Mean fitness in deme α as a function of z
Wα(X) (6.2) Fitness of individuals with trait value X in deme α
W (7.3)+ Open set of parameters
wij,α (2.1)- Fitness of genotype ij in deme α
wi,α (2.1) Marginal fitness of gamete i in deme α
wi,α (4.1)- Fitness of gamete i in deme α (only Section 4)
w¯α (2.1) Mean fitness in deme α
w˜ (2.13) Geometric-mean fitness
w¯ˆα (3.1)- w¯α(ρˆ)
X (6.1) Value of quantitative trait
Xij,α (6.1) nγinjn,α(n)
xˆ (5.11)+ (c1/w¯ˆ1,,cΓ/w¯ˆΓ)T
z(n) (5.14) f(n)(p(n))
z (5.14)+ (z(1),,z(L))T

α (2.1)- Deme index
β (2.1)- Deme index
Γ (2.1)- Number of demes
γinjn,α(n) (6.1)+ Contribution of Ain(n)Ajn(n) to trait value
γinjn(n) (6.6) Deme-independent contribution of Ain(n)Ajn(n) to trait value
γα (6.6) Genotype-independent contribution to trait value
ΔJ (2.3)- Simplex in RJ
Δ (2.15)- Difference operator
δij (2.17)- Kronecker delta
ϑinjn(n) (3.6) Degree of intermediate dominance
ϑinjn(n) (6.5) Degree of intermediate dominance at trait level
ϑ(n) (5.7) Degree of intermediate dominance in the diallelic case
ϑ (5.9)+ (ϑ(1),,ϑ(L))T
ϑ (6.15)- ϑ12
ϑin(n) (6.8) Degree of intermediate dominance of Ain(n) at the trait level
ϵ (7.1a)- Small positive parameter
Λ (2.11) {pΔJ:ρ=ρ}
Λˆ (2.18) {pΔJ:ρ=ρˆ}
Ξ (2.12) Linkage-equilibrium manifold
ξinjn(n) (2.8a) Averaged relative fitness of Ain(n)Ajn(n)
ξˆinjn(n) (2.18)+ ξinjn(n) at gene-frequency equilibrium
ξin(n) (2.8b) Averaged relative fitness of Ain(n)
ξˆin(n) (2.18)+ ξin(n) at gene-frequency equilibrium
ξ¯(n) (2.8c) Averaged mean fitness at locus n
ξ¯ˆ(n) (2.18)+ ξ¯(n) at gene-frequency equilibrium
ξin(n) (4.3) Averaged relative fitness of Ain(n) (only Section 4)
ρ (2.3)- Vector of allele frequencies
ρ (5.1) Vector of allele frequencies (diallelic case)
ρˆ (2.18)- ρ at gene-frequency equilibrium
Σ0 (7.1b)+ Set of equilibria without epistasis
Σw(ϵ) (7.1b)+ Set of equilibria with epistasis
ϕin(n) (6.11) Allele specific factor of fitness excess
Ω (2.3) Gene-frequency space
Ω (5.1) Gene-frequency space (diallelic case)

(2.2) Value of quantity in next generation
(2.3)- Subset
T (2.3)- Transposition of a vector
int (5.9)+ Topological interior of a set
rank (5.12) Rank of a matrix
dim (5.11)+ Dimension of a linear subspace
ker (5.11)+ Kernel of a linear map or matrix
(n) (2.17)+ Gradient operator