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. 2010 Jun 11;38(19):6513–6525. doi: 10.1093/nar/gkq524

Table 1.

ANOVA in log10-transformed number of genes in the NBS and RLK families within a cultivar, within a subspecies, within a species, among subspecies and among species in Oryza, Glycine and Gossipium

Genome No. of lines df NBS
 RLKa
F-value P-value F-value P-value
Oryza
Different plants within a cultivar
 cv. Teqing AA 23 0.715 0.554 0.587 0.650
 cv. Nipponbare AA 29 1.085 0.385 1.297 0.305
Different cultivars within a subspecies
 ssp. indica AA 6 53 7.872*** 0.000 4.000** 0.009
 ssp. japonica AA 6 59 10.718*** 0.000 1.459 0.280
 ssp. javanica AA 6 35 12.366*** 0.000 2.013 0.162
Among subspecies of a species
 Ind–jap–jav AA 18 149 12.840*** 0.000 9.477*** 0.000
Different cultivars or accessions within a species
 O. sativa AA 18 149 11.731*** 0.000 3.676*** 0.000
 O. rufipogon AA 3 17 0.193 0.826 1.053 0.429
 O. glaberrima AA 7 41 4.986*** 0.001 0.869 0.549
 O. barthii AA 4 23 15.611*** 0.000 8.984** 0.003
 O. punctata BB 5 29 3.059* 0.035 0.671 0.629
 O. eichingeri CC 5 29 1.277 0.306 1.595 0.257
 O. officinalis CC 4 23 4.794* 0.011 14.323*** 0.001
 O. rhizomatis CC 3 17 3.176 0.071 4.531 0.075
 O. punctata BBCC 5 29 5.679** 0.002 6.363* 0.017
 O. minuta BBCC 5 29 1.926 0.137 6.446** 0.008
 O. alta CCDD 2 11 12.910** 0.005 37.584*** 0.001
Among different species
 Diploids 49 305 97.356*** 0.000 29.909*** 0.000
 Polyploids BBCC 10 59 5.663* 0.021 5.379* 0.029
Glycine
Different cultivars or accessions within a species
 G. max GG 11 87 25.007*** 0.000 5.534*** 0.000
 G. soja GG 9 71 20.867*** 0.000 4.920*** 0.000
Among different species
 Diploids 10 223 18.667*** 0.000 11.408*** 0.000
Gossypium
Different cultivars or accessions within a species
 G. herbaceum A1A1 10 59 19.395*** 0.000
 G. arboreum A2A2 4 23 9.326*** 0.000
 G. armourianum D2-1D2-1 2 10 0.245 0.632
 G. klotzchianum D3-kD3-k 3 14 0.168 0.847
 G. raimondii D5D5 3 17 0.302 0.744
 G. gossypioides D6D6 2 11 0.429 0.527
 G. trilobum D8D8 3 16 0.026 0.974
 G. hirsutum (AADD)1 9 53 6.114*** 0.000
 G. barbadense (AADD)2 5 29 3.018* 0.037
 G. tomentosum (AADD)3 12 77 1.404 0.192
 G. mustelinum (AADD)4 3 17 2.312 0.133
 G. darwinii (AADD)5 2 17 2.038 0.173
Among different species
 Diploids 65 372 4.737*** 0.000
 Polyploids 31 197 5.204*** 0.000

aThe variation of the RLK family size was not studied in Gossypium.

The variation is significant in two-tailed test at *P ≤ 0.05, **P ≤ 0.01 and ***P ≤ 0.001.