Table 3. Results for any SNPs that replicated in any independent sample.
Association analysis for minor allelea | |||||
SNP | Gene | Discovery familiesb | 102 UK familiesb | 152 US familiesb | 317 UK DD cases and 287 population controlsc |
rs11874896 | EPB41L3 | [-] P<0.001 (PA) | [-] 0.05 (OC-irreg) | n/s | n/s |
rs1299348 | MC5R | 0.006 (OC-irreg)0.005 (OC-choice)0.001 (READ) | 0.04 (SPELL) | n/s | 0.009 (allelic)0.009 (genotypic) |
rs10502812 | AK131011 | [-] P<0.001 (PD) | n/s | −0.05 (PD)−0.03 (SPELL) | n/s |
rs11661879 | KIAA0427 | 0.03 (OC-irreg)0.001 (SPELL)0.02 (PA) | 0.04 (SPELL) | n/s | n/s |
rs11873029 | DYM | 0.004 (PD)0.001 (PA) | 0.01 (OC-choice) | n/s | 0.006 (allelic)0.02 (genotypic) |
rs555879 | MYO5B | 0.03 (PD)0.02 (SPELL)0.002 (PA) | n/s | n/s | 0.03 (genotypic) |
rs8094327 | NEDD4L | 0.02 (OC-irreg)0.008 (PD)0.002 (READ)0.04 (SPELL) | n/s | n/s | 0.007 (allelic)0.007 (genotypic) |
rs12606138 | NEDD4L | 0.02 (OC-irreg)0.007 (PD)0.002 (READ)0.04 (SPELL) | n/s | n/s | 0.005 (allelic)0.002 (genotypic) |
absolute values presented are p-values for the minor allele, and the negative sign [-] indicates an association of risk for DD with that allele, else that allele confers protection against DD. n/s means not significant (p-value>0.05) – the actual p-values are available in the supplementary tables;
the acronyms OC-irreg, PD, OC-choice, READ, SPELL and PA in brackets refer to the trait giving association with QTDT;
the terms allelic or genotypic in brackets indicate the allelic or genotypic test for that p-value.