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. 2010 Oct 28;6(10):e1001184. doi: 10.1371/journal.pgen.1001184

Table 2. Results for the five loci associated (p<5.0×10−8) with retinal venular caliber in the discovery cohorts both combined and individually.

Discovery cohorts combined Discovery cohorts individually
CHARGE AGES ARIC CHS RS
SNP (chromosome position) locus Minor allele (MAF) Beta SE P-value Beta SE P-value Beta SE P-value Beta SE P-value Beta SE P-value Genes of Interest Other genes within 60kb Additional SNPs at p-value<5×10−8
rs2287921 (53920084)19q13 T (0.47) −2.0 0.23 3.30×10−18 −1.0 0.56 7.40×10−2 −2.5 0.36 3.80×10−12 −2.9 0.77 1.66×10−4 −1.7 0.42 5.17×10−5 RASIP1 IZUMO1, FUT1 FUT2, CA11 FGF21, FLJ36070 37
rs225717 (142589792)6q24 C (0.23) −1.8 0.27 5.99×10−12 −1.9 0.60 1.54×10−3 −2.2 0.40 7.25×10−8 −2.0 0.96 3.70×10−2 −1.3 0.50 9.32×10−3 VTA1 NMBR 31
rs10774625 (110394602)12q24 A (0.48) 1.6 0.23 1.16×10−11 1.3 0.43 2.50×10−3 1.5 0.35 1.82×10−5 1.9 0.75 1.10×10−2 1.7 0.43 7.70×10−5 ATXN2 SH2B3, PTPN11 9
rs17421627 (87883342)5q14 G (0.08) 2.5 0.43 5.05×10−9 2.2 1.16 5.80×10−2 1.6 0.63 1.10×10−2 5.3 1.91 5.52×10−3 3.2 0.71 6.57×10−6 - MEF2C 28
rs7824557 (11141521)8p23 G (0.39) 1.4 0.23 2.17×10−9 1.6 0.56 4.27×10−3 0.8 0.35 2.2×10−2 1.7 0.84 4.30×10−2 2.2 0.43 5.32×10−7 - XKR6, PINX1 SOX7, MTMR9 GATA4 69

CHARGE: Cohorts for Heart and Aging Research in Genomic Epidemiology consortium; AGES: Age Gene/Environment Susceptibility – Reykjavik Study; ARIC: Atherosclerosis Risk in Communities Study; CHS: Cardiovascular Health Study; RS: Rotterdam Study; SNP: single nucleotide polymorphism; MAF: minor allele frequency; Beta: Change in retinal venular calibre for each copy of the minor allele; SE: standard error.