Table 1. DUX4 mRNA expression in FSHD and control biopsies.
Biopsy Code | Status | HaplotypesA | DUX4-fl | DUX4-s | 3-prime |
F 1998 | FSHD | A161(10)/n.d. | XS | O | XS |
F 0519 | FSHD | A161(8)/A161 | XS | O | XS |
F-0515 | FSHD | A161(5)/A161 | XS | O | XS |
F-0509 | FSHD | A161(5)/A166H | O | XS | O |
F-0531 | FSHD | A161(7)/A161 | O | XS | O |
F-2306 | FSHD | A161(4)/B163 | O | X | O |
F-2331 | FSHD | A161(3)/B163 | X | O | XS |
F-2316 | FSHD | A161(6)/A168 | X | O | XS |
F-2319 | FSHD | A161(5)/B168 | O | X | O |
F-2315 | FSHD | A161(5)/B168 | O | O | O |
C22 | contr | A161/B163 | O | X | O |
C34 | contr | A161/B163 | O | XS | O |
C40 | contr | A161/B168 | O | X | O |
2333 | contr | A161/A161 | O | X | O |
2397 | contr | A161/B168 | O | X | O |
2401 | contr | A161/B168 | O | X | O |
2398 | contr | A161/B163 | O | X | O |
C33 | contr | A166/B170 | O | X | O |
C39 | contr | A166/B168 | O | O | O |
C10 | contr | B168/B168 | O | O | O |
C11 | contr | B168/B163 | O | O | O |
C31 | contr | B163/B163 | O | O | O |
2318* | contr | B169/B166 | O | O | O |
C20 | contr | B168/B168 | O | O | O |
C38 | contr | B162/B163 | O | O | O |
Chrosome 4 haplotype. For FSHD the number in paratheses indicates the number of D4Z4 units on the contracted allele; n.d., indicates that the haplotype of the second allele was not determined.
X, product present; XS, product sequenced; O, product absent.
*has contracted 10qA allele with 9 repeats.