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. 2010 Aug 10;103(6):877–884. doi: 10.1038/sj.bjc.6605811

Table 3. Downregulated genes by miR-489 treatment in FaDu cells.

No. Symbol Gene Name Gene ID Location Fold Target sites
 1 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 NM_016396 15q15.3 −3.59 3
 2 PTPN11 Protein tyrosine phosphatase, non-receptor type 11 (Noonan syndrome 1) NM_002834 12q24.13 −3.40 2
 3 GPR110 G protein-coupled receptor 110 NM_025048 6p12.3 −3.05
 4 CLIP4 CAP-GLY domain containing linker protein family, member 4 NM_024692 2p23.2 −2.87 1
 5 VGF VGF nerve growth factor inducible NM_003378 7q22.1 −2.85
 6 CD244 CD244 molecule, natural killer cell receptor 2B4 NM_016382 1q23.3 −2.72
 7 SUZ12 Suppressor of zeste 12 homologue (Drosophila) NM_015355 17q11.2 −2.68 3
 8 LIN28B Lin-28 homologue B (Caenorhabditis elegans) NM_001004317 6q21 −2.68 1
 9 AP1S1 Adaptor-related protein complex 1, sigma 1 subunit NM_001283 7q22.1 −2.62 1
10 NF2 Neurofibromin 2 (merlin) NM_181831 22q12.2 −2.55 1
11 AP1M2 Adaptor-related protein complex 1, mu 2 subunit NM_005498 19p13.2 −2.54 1
12 A2ML1 Alpha-2-macroglobulin-like 1 NM_144670 12p13.31 −2.52
13 CRIPT Cysteine-rich PDZ-binding protein NM_014171 2p21 −2.51 1
14 EGR1 Early growth response 1 NM_001964 5q31.2 −2.51
15 CYP1B1 Cytochrome P450, family 1, subfamily B, polypeptide 1 NM_000104 2p22.2 −2.49 2
16 NAP1L1 Nucleosome assembly protein 1-like 1 NM_139207 12q21.2 −2.48
17 AHNAK AHNAK nucleoprotein NM_001620 11q12.3 −2.48
18 FAM26E Family with sequence similarity 26, member E NM_153711 6q22.1 −2.43 1
19 RAVER2 Ribonucleoprotein, PTB-binding 2 NM_018211 1p31.3 −2.42
20 RASL10A RAS-like, family 10, member A NM_001007279 22q12.2 −2.40
21 C14orf147 Chromosome 14 open reading frame 147 NM_138288 14q13.1 −2.38 1
22 C14orf143 Chromosome 14 open reading frame 143 NM_145231 14q32.11 −2.37 1
23 HTR2B 5-hydroxytryptamine (serotonin) receptor 2B NM_000867 2q37.1 −2.37 1
24 MYLK Myosin light chain kinase NM_053025 3q21.1 −2.33
25 TFAP4 Transcription factor AP-4 (activating enhancer-binding protein 4) NM_003223 16p13.3 −2.33 1
26 MYO3B Myosin IIIB NM_138995 2q31.1 −2.32 1
27 OSTM1 Osteopetrosis-associated transmembrane protein 1 NM_014028 6q21 −2.32 1
28 MARCKS Myristoylated alanine-rich protein kinase C substrate NM_002356 6q22.1 −2.29 2
29 KCTD4 Potassium channel tetramerisation domain-containing 4 NM_198404 13q14.12 -2.26 1
30 GCLC Glutamate-cysteine ligase, catalytic subunit NM_001498 6p12.1 −2.26
31 ERRFI1 ERBB receptor feedback inhibitor 1 NM_018948 1p36.23 −2.26 1
32 MDH1 Malate dehydrogenase 1, NAD (soluble) NM_005917 2p15 −2.26
33 IL15 Interleukin 15 NM_172174 4q31.21 −2.26
34 ZCCHC5 Zinc finger, CCHC domain-containing 5 NM_152694 Xq21.1 −2.26
35 GRB10 Growth factor receptor-bound protein 10 NM_001001555 7p12.2 −2.25 2
36 KLHL5 Kelch-like 5 (Drosophila) NM_015990 4p14 −2.21 1
37 BLID BH3-like motif containing, cell death inducer NM_001001786 11q24.1 −2.20
38 CFL2 Cofilin 2 (muscle) NM_021914 14q13.2 −2.19 3
39 SLC24A1 Solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 NM_004727 15q22.31 −2.17 1
40 CDIPT CDP-diacylglycerol–inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) NM_006319 16p11.2 −2.14 1
41 RTP4 Receptor (chemosensory) transporter protein 4 NM_022147 3q27.3 −2.14
42 ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide NM_001679 3q23 −2.14 1
43 NCOA3 Nuclear receptor coactivator 3 NM_181659 20q13.12 −2.14 2
44 CDK6 Cyclin-dependent kinase 6 NM_001259 7q21.2 −2.12 1
45 RP11-11C5.2 Similar to RIKEN cDNA 2410129H14 NM_001071775 13q22.1 −2.11 2
46 UNQ9438 TIMM9 NM_207377 14q23.1 −2.08
47 MAGEH1 Melanoma antigen family H, 1 NM_014061 Xq11.21 −2.07
48 HPS3 Hermansky–Pudlak syndrome 3 NM_032383 3q24 −2.05 1
49 RNF149 Ring finger protein 149 NM_173647 2q11.2 −2.04
50 NUPL1 Nucleoporin-like 1 NM_014089 13q12.13 −2.03
51 SLC25A40 Solute carrier family 25, member 40 NM_018843 7q21.12 −2.03
52 ZCCHC4 Zinc finger, CCHC domain-containing 4 NM_024936 4p15.2 −2.02 1
53 TMEM64 Transmembrane protein 64 NM_001008495 8q21.3 −2.01 1