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. 2010 Sep;131(1):40–49. doi: 10.1111/j.1365-2567.2010.03270.x

Table 1.

Primer sets for real-time reverse transcription–polymerase chain reaction

Primer Accession no. Orientation Sequences
GAPDH NM_002046 Sense: 5′-GGTGGTCTCCTCTGACTTCAACA-3′
Antisense: 5′-GTTGCTGTAGCCAAATTCGTTGT-3′
IFN-α NM_002175 Sense: 5′-TTTCTCCTGCCTGAAGGACAG-3′
Antisense: 5′-GCTCATGATTTCTGCTCTGACA-3′
IFN-β NM_002176 Sense: 5′-GCCGCATTGACCATCTATGAGA-3′
Antisense: 5′-GAGATCTTCAGTTTCGGAGGTAAC-3′
IRF-1 NM_002198 Sense: 5′-TGAAGCTACAACAGATGAGG-3′
Antisense: 5′-AGTAGGTACCCCTTCCCATC-3′
IRF-3 NM_001571 Sense: 5′-ACCAGCCGTGGACCAAGAG-3′
Antisense: 5′-TACCAAGGCCCTGAGGCAC-3′
IRF-5 NM_001098631 Sense: 5′-AAGCCGATCCGGCCAA-3′
Antisense: 5′-GGAAGTCCCGGCTCTTGTTAA-3′
IRF-7 NM_001572 Sense: 5′-TGGTCCTGGTGAAGCTGGAA-3′
Antisense: 5′-GATGTCGTCATAGAGGCTGTTGG-3′
IRF-9 NM_006084 Sense: 5′-GCATCAGGCAGGGCACGCTGCACC-3′
Antisense: 5′-GCCTGCATGTTTCCAGGGAATCCG-3′
TLR-1 NM_003263 Sense: 5′-GCCTATATGCAAAGAGTTTGGC-3′
Antisense: 5′-CTCTCCTAAGACCAGCAAGACC-3′
TLR-2 NM_003264 Sense: 5′-GGCTTCTCTGTCTTGTGACC-3′
Antisense: 5′-GGGCTTGAACCAGGAAGACG-3′
TLR-3 NM_003265 Sense: 5′-AGCCACCTGAAGTTGACTCAGG-3′
Antisense: 5′-CAGTCAAATTCGTGCAGAAGGC-3′
TLR-4 NM_138554 Sense: 5′-CAGAGTTTCCTGCAATGGATCA-3′
Antisense: 5′-GCTTATCTGAAGGTGTTGCACAT-3′
TLR-5 NM_003268 Sense: 5′-AGCCATCTGACTGCATTAAGG-3′
Antisense: 5′-GACTTCCTCTTCATCACAACC-3′
TLR-6 NM_006068 Sense: 5′-ATTGAAAGCATTCGTGAAGAAG-3′
Antisense: 5′-ACGGTGTACAAAGCTGTCTGTG-3′
TLR-7 NM_016562 Sense: 5′-AAAATGGTGTTTCCAATGTGG-3′
Antisense: 5′-GGCAGAGTTTTAGGAAACCATC-3′
TLR-8 NM_138636 Sense: 5′-TTATGTGTTCCAGGAACTCAGAGAA-3′
Antisense: 5′-TAATACCCAAGTTGATAGTCGATAAGTTTG-3′
TLR-9 NM_017442 Sense: 5′-TACCAACATCCTGATGCTAGACTC-3′
Antisense: 5′-TAGGACAACAGCAGATACTCCAGG-3′
TLR-10 NM_001017388 Sense: 5′-GGCCAGAAACTGTGGTCAAT-3′
Antisense: 5′-AAATGACTGCATCCAGGGAG-3′
MIP1-α NM_002983 Sense: 5′-GCTGACTACTTTGAGACGAGC-3′
Antisense: 5′-CCAGTCCATAGAAGAGGTAGC-3′
MIP1-β NM_002984 Sense: 5′-CCAAACCAAAAGAAGCAAGC-3′
Antisense: 5′-AGAAACAGTGACAGTGGACC-3′
A3G NM_021822 Sense: 5′-TCAGAGGACGGCATGAGACTTAC-3′
Antisense: 5′-AGCAGGACCCAGGTGTCATTG-3′
MxA M_30817 Sense: 5′-GCCGGCTGTGGATATGCTA-3′
Antisense: 5′-TTTATCGAAACATCTGTGAAAGCAA-3′
ISG56 X_03557 Sense: 5′-TTCGGAGAAAGGCATTAGA-3′
Antisense: 5′-TCCAGGGCTTCATTCATAT-3′
OSA-1 NM_016816 Sense: 5′-AGAAGGCAGCTCACGAAACC-3′
Antisense: 5′-CCACCACCCAAGTTTCCTGTA-3′
PKR NM_003690 Sense: 5′-AGAGTAACCGTTGGTGACATAACCT-3′
Antisense: 5′-GCAGCCTCTGCAGCTCTATGTT-3′
Tetherin BC_033873 Sense: 5′-AAGAAAGTGGAGGAGCTTGAGG-3′
Antisense: 5′-CCTGGTTTTCTCTTCTCAGTCG-3′