Skip to main content
Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Feb 21;65(Pt 3):o578. doi: 10.1107/S1600536809005327

N-[Morpholino(phen­yl)meth­yl]benzamide

L Muruganandam a, S Rajeswari a, D Tamilvendan a, V Ramkumar b, G Venkatesa Prabhu a,*
PMCID: PMC2968586  PMID: 21582233

Abstract

The title compound, C18H20N2O2, crystallizes with two mol­ecules in the asymmetric unit. The morpholine rings of both mol­ecules adopt chair conformations. The crystal structure is stabilized by inter­molecular N—H⋯O hydrogen bonds. One phenyl ring is disordered over two orientations in a 0.665 (5):0.335 (5) ratio.

Related literature

For background literature on benzamides and morpholines, see: Carbonnelle et al. (2005); Hatzelmann & Schudt (2001); Li et al. (1998); Malik et al. (2006); Sedavkina et al. (1984); Simonini et al. (2006); Suzuki et al. (2005); Zhou et al. (1999); Zhou et al. (1999). For ring conformations, see: Cremer & Pople (1975).graphic file with name e-65-0o578-scheme1.jpg

Experimental

Crystal data

  • C18H20N2O2

  • M r = 296.36

  • Triclinic, Inline graphic

  • a = 9.9190 (3) Å

  • b = 10.6793 (3) Å

  • c = 15.8050 (5) Å

  • α = 79.747 (2)°

  • β = 85.543 (1)°

  • γ = 85.467 (1)°

  • V = 1638.84 (9) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.08 mm−1

  • T = 295 K

  • 0.20 × 0.19 × 0.08 mm

Data collection

  • Bruker APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 1999) T min = 0.979, T max = 0.994

  • 21213 measured reflections

  • 7329 independent reflections

  • 4069 reflections with I > 2σ(I)

  • R int = 0.033

Refinement

  • R[F 2 > 2σ(F 2)] = 0.052

  • wR(F 2) = 0.156

  • S = 1.03

  • 7329 reflections

  • 417 parameters

  • 1 restraint

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.24 e Å−3

  • Δρmin = −0.19 e Å−3

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97.

Supplementary Material

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005327/hb2906sup1.cif

e-65-0o578-sup1.cif (30.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005327/hb2906Isup2.hkl

e-65-0o578-Isup2.hkl (351.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N4—H4⋯O2 0.85 (2) 2.11 (2) 2.932 (2) 163.5 (17)
N2—H2⋯O4i 0.832 (19) 2.10 (2) 2.918 (2) 166.5 (17)

Symmetry code: (i) Inline graphic.

Acknowledgments

The authors thank the Department of Chemistry, IIT­Madras, Chennai, India, for the data collection.

supplementary crystallographic information

Comment

Benzamide derivatives, known for their anti-inflammatory and immunomodulatory (Hatezelmann et al., 2001; Carbonnelle et al., 2005), anti-tumoral (Suzuki et al., 2005), antipsychotic (Simonini et al., 2006), and antiallergic (Zhou et al.,1999) activities, are drugs widely used in medicine (Malik et al., 2006).

Morpholine is a multipurpose chemical which is used as a solvent for resins, dyes and waxes. One of its most important use is as a chemical intermediate in the preparation of pesticides (Li et al., 1998). A number of morpholine derivatives have been described as analgesics and local anesthetics. The morpholinomethyl derivative of pyrizinamide (morphozinamide) has been found to be more effective in the treatment of tuberculosis than pyrizinamide (Sedavkina et al., 1984).

In the title compound, (I), each of the two independent molecules contains three ring systems, one phenyl ring, one benzamide and a morpholino ring (Fig. 1).

The morpholine rings of the two molecules adopts the usual chair conformation (QT = 0.577 (2) Å, q(2)=0.012 (2)Å and q(3)=0.577 (2) Å, θ = 1.4 (2)°. (Cremer & Pople, 1975). The best planes of the rings pass through the C atoms, leaving the O and N atoms on either side. The methine (C—H) substitution (C5) of the morpholine ring is in an equatorial position. One of the benzamide moiety in the crystal structure is disordered with an occupancy factor of 0.33 and 0.67. The phenyl moiety is planar. The crystal structure is stabilized by intermolecular N—H···O hydrogen bonds (Table 1).

Experimental

Benzamide (12.1 g, 0.1 mol) was dissolved in a minimum quantity of ethanol. To this solution, benzaldehdye (10 ml, 0.1 mol) followed by morpholine (9 ml, 0.1 mol) was added in small quantities with constant stirring in an ice bath. For about 2 hrs, the mixture was kept at ice cold temperature. After 10 days a pale yellow semi-solid was obtained. The product was purified by washing with distilled water several times and finally with 5 ml of acetone. The compound was dried in an air oven at 80° C and recrystallized from ethanol to yield colourless slabs of (I).

Refinement

One of the benzamide groups in the crystal structure is disordered with occupancy factor of 0.33 and 0.67. The H atoms were positioned geometrically and refined using riding model, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) for aromatic C—H, C—H = 0.97 Å and Uiso(H) = 1.2Ueq(C) for CH2. The H atoms associated with nitrogen atoms were located from difference maps and refined.

Figures

Fig. 1.

Fig. 1.

The molecular structure of (I); displacement ellipsoids for the non-hydrogen atoms are drawn with 30% probability.

Crystal data

C18H20N2O2 Z = 4
Mr = 296.36 F(000) = 632
Triclinic, P1 Dx = 1.201 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 9.9190 (3) Å Cell parameters from 4916 reflections
b = 10.6793 (3) Å θ = 2.2–23.9°
c = 15.8050 (5) Å µ = 0.08 mm1
α = 79.747 (2)° T = 295 K
β = 85.543 (1)° Slab, colourless
γ = 85.467 (1)° 0.20 × 0.19 × 0.08 mm
V = 1638.84 (9) Å3

Data collection

Bruker APEXII CCD diffractometer 7329 independent reflections
Radiation source: fine-focus sealed tube 4069 reflections with I > 2σ(I)
graphite Rint = 0.033
ω scans θmax = 28.1°, θmin = 1.3°
Absorption correction: multi-scan (SADABS; Bruker, 1999) h = −10→12
Tmin = 0.979, Tmax = 0.994 k = −14→14
21213 measured reflections l = −20→18

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.156 w = 1/[σ2(Fo2) + (0.0693P)2 + 0.2499P] where P = (Fo2 + 2Fc2)/3
S = 1.03 (Δ/σ)max < 0.001
7329 reflections Δρmax = 0.24 e Å3
417 parameters Δρmin = −0.19 e Å3
1 restraint Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methods Extinction coefficient: 0.0061 (15)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
H4 0.424 (2) 0.6985 (17) 0.1586 (12) 0.046 (5)*
H2 0.920 (2) 0.7527 (17) 0.1718 (12) 0.045 (5)*
C1 1.0046 (2) 0.93888 (19) 0.38352 (14) 0.0601 (6)
H1A 0.9678 0.9089 0.4416 0.072*
H1B 1.1011 0.9456 0.3857 0.072*
C2 0.98194 (17) 0.84343 (17) 0.32713 (12) 0.0446 (4)
H2A 1.0231 0.8702 0.2697 0.054*
H2B 1.0239 0.7607 0.3506 0.054*
C3 0.7737 (2) 0.9600 (2) 0.29057 (14) 0.0615 (6)
H3A 0.6767 0.9551 0.2893 0.074*
H3B 0.8100 0.9901 0.2324 0.074*
C4 0.8019 (3) 1.0509 (2) 0.34844 (17) 0.0762 (7)
H4A 0.7597 1.1345 0.3272 0.091*
H4B 0.7620 1.0219 0.4059 0.091*
C5 0.79770 (17) 0.73575 (17) 0.27916 (11) 0.0416 (4)
H5 0.6984 0.7412 0.2832 0.050*
C6 0.84088 (17) 0.60273 (18) 0.32558 (11) 0.0431 (4)
C7 0.8263 (2) 0.5763 (2) 0.41468 (13) 0.0641 (6)
H7 0.7950 0.6411 0.4449 0.077*
C8 0.8572 (3) 0.4560 (2) 0.45923 (16) 0.0782 (8)
H8 0.8476 0.4404 0.5191 0.094*
C9 0.9018 (2) 0.3597 (2) 0.41592 (17) 0.0721 (7)
H9 0.9222 0.2781 0.4460 0.086*
C10 0.9165 (2) 0.3834 (2) 0.32819 (16) 0.0655 (6)
H10 0.9469 0.3178 0.2985 0.079*
C11 0.88661 (19) 0.5043 (2) 0.28309 (13) 0.0542 (5)
H11 0.8975 0.5193 0.2232 0.065*
C12 0.75048 (18) 0.75042 (19) 0.12841 (12) 0.0470 (5)
C13 0.80194 (18) 0.7748 (2) 0.03612 (12) 0.0501 (5)
C14 0.8036 (3) 0.6824 (3) −0.01283 (16) 0.0868 (8)
H14 0.7759 0.6020 0.0117 0.104*
C15 0.8471 (3) 0.7081 (4) −0.1008 (2) 0.1097 (12)
H15 0.8510 0.6444 −0.1342 0.132*
C16 0.8837 (3) 0.8282 (5) −0.13637 (18) 0.1034 (11)
H16 0.9098 0.8467 −0.1948 0.124*
C17 0.8821 (3) 0.9187 (4) −0.0879 (2) 0.1071 (11)
H17 0.9080 0.9996 −0.1126 0.128*
C18 0.8423 (3) 0.8927 (3) −0.00143 (16) 0.0831 (8)
H18 0.8429 0.9562 0.0319 0.100*
C19 0.3099 (2) 0.32634 (19) 0.35265 (15) 0.0621 (6)
H19A 0.2771 0.3350 0.4109 0.074*
H19B 0.2636 0.2585 0.3363 0.074*
C20 0.27701 (19) 0.44881 (18) 0.29285 (13) 0.0512 (5)
H20A 0.3042 0.4392 0.2339 0.061*
H20B 0.1801 0.4700 0.2967 0.061*
C21 0.49322 (17) 0.51686 (17) 0.31197 (13) 0.0474 (5)
H21A 0.5411 0.5837 0.3284 0.057*
H21B 0.5247 0.5080 0.2535 0.057*
C22 0.5214 (2) 0.39299 (19) 0.37222 (14) 0.0591 (5)
H22A 0.6180 0.3701 0.3695 0.071*
H22B 0.4935 0.4039 0.4308 0.071*
C23 0.30607 (16) 0.67541 (16) 0.26940 (10) 0.0355 (4)
H23 0.2068 0.6819 0.2759 0.043*
C24 0.35210 (16) 0.78231 (16) 0.30993 (11) 0.0369 (4)
C25 0.36414 (19) 0.90344 (17) 0.26293 (12) 0.0479 (5)
H25 0.3521 0.9183 0.2041 0.057*
C26 0.3938 (2) 1.00258 (19) 0.30196 (14) 0.0574 (5)
H26 0.4007 1.0837 0.2694 0.069*
C27 0.4132 (2) 0.98284 (19) 0.38818 (15) 0.0588 (6)
H27 0.4330 1.0501 0.4143 0.071*
C28 0.4031 (2) 0.8632 (2) 0.43562 (14) 0.0618 (6)
H28 0.4173 0.8489 0.4941 0.074*
C29 0.3720 (2) 0.76369 (18) 0.39714 (12) 0.0509 (5)
H29 0.3643 0.6830 0.4302 0.061*
C30 0.24685 (18) 0.70289 (18) 0.11932 (11) 0.0440 (4)
C31 0.29382 (18) 0.7137 (2) 0.02652 (12) 0.0536 (5)
C32 0.2052 (2) 0.7115 (3) −0.03215 (14) 0.0763 (7)
H32 0.1141 0.7053 −0.0143 0.092*
C33 0.2436 (3) 0.7181 (3) −0.11813 (15) 0.0907 (9)
H33 0.1813 0.7438 −0.1599 0.109*
C34 0.355 (2) 0.6909 (19) −0.1370 (12) 0.088 (3) 0.337 (5)
H34 0.3805 0.6916 −0.1950 0.105* 0.337 (5)
C35 0.4530 (12) 0.6576 (19) −0.0792 (7) 0.151 (4) 0.337 (5)
H35 0.5428 0.6396 −0.0973 0.181* 0.337 (5)
C36 0.4148 (10) 0.6518 (15) 0.0041 (6) 0.112 (2) 0.337 (5)
H36 0.4689 0.6068 0.0463 0.134* 0.337 (5)
C34A 0.3751 (10) 0.7434 (8) −0.1504 (5) 0.088 (3) 0.665 (5)
H34A 0.4027 0.7427 −0.2079 0.105* 0.665 (5)
C35A 0.4608 (5) 0.7689 (9) −0.0943 (3) 0.151 (4) 0.665 (5)
H35A 0.5469 0.7938 −0.1145 0.181* 0.665 (5)
C36A 0.4223 (4) 0.7585 (7) −0.0062 (3) 0.112 (2) 0.665 (5)
H36A 0.4809 0.7810 0.0310 0.134* 0.665 (5)
N1 0.83673 (14) 0.83410 (14) 0.32292 (9) 0.0431 (4)
N2 0.83821 (16) 0.75434 (15) 0.18720 (9) 0.0433 (4)
N3 0.34807 (13) 0.55046 (13) 0.31612 (9) 0.0369 (3)
N4 0.34120 (15) 0.69325 (14) 0.17671 (9) 0.0397 (4)
O1 0.94265 (16) 1.06078 (13) 0.35261 (10) 0.0716 (5)
O2 0.63267 (14) 0.7272 (2) 0.14833 (10) 0.0927 (6)
O3 0.45161 (15) 0.29292 (12) 0.35088 (9) 0.0622 (4)
O4 0.12536 (13) 0.70222 (17) 0.14163 (9) 0.0694 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
C1 0.0634 (13) 0.0525 (13) 0.0676 (15) −0.0006 (10) −0.0101 (11) −0.0180 (11)
C2 0.0409 (10) 0.0458 (11) 0.0473 (11) −0.0016 (8) −0.0037 (8) −0.0086 (9)
C3 0.0511 (12) 0.0625 (14) 0.0687 (15) 0.0135 (10) −0.0069 (10) −0.0117 (11)
C4 0.0826 (18) 0.0589 (15) 0.0865 (18) 0.0211 (12) −0.0035 (13) −0.0233 (13)
C5 0.0335 (9) 0.0555 (12) 0.0349 (10) −0.0077 (8) 0.0019 (7) −0.0050 (8)
C6 0.0382 (10) 0.0536 (12) 0.0379 (11) −0.0148 (8) −0.0018 (8) −0.0046 (9)
C7 0.0928 (17) 0.0605 (14) 0.0413 (13) −0.0270 (12) −0.0030 (11) −0.0057 (10)
C8 0.114 (2) 0.0689 (17) 0.0519 (14) −0.0410 (14) −0.0205 (13) 0.0112 (13)
C9 0.0731 (16) 0.0569 (15) 0.0826 (19) −0.0201 (11) −0.0242 (13) 0.0130 (13)
C10 0.0576 (14) 0.0537 (14) 0.0823 (18) −0.0037 (10) −0.0003 (11) −0.0062 (12)
C11 0.0490 (12) 0.0623 (14) 0.0494 (12) −0.0053 (9) 0.0026 (9) −0.0069 (10)
C12 0.0378 (11) 0.0611 (12) 0.0406 (11) −0.0096 (8) −0.0041 (8) −0.0011 (9)
C13 0.0401 (11) 0.0722 (14) 0.0375 (11) −0.0085 (9) −0.0079 (8) −0.0037 (10)
C14 0.0871 (19) 0.118 (2) 0.0651 (17) −0.0422 (16) 0.0116 (13) −0.0345 (16)
C15 0.086 (2) 0.187 (4) 0.076 (2) −0.031 (2) −0.0014 (16) −0.068 (2)
C16 0.078 (2) 0.182 (4) 0.0451 (16) −0.008 (2) −0.0085 (13) −0.002 (2)
C17 0.120 (3) 0.116 (3) 0.065 (2) −0.001 (2) 0.0143 (17) 0.0269 (19)
C18 0.104 (2) 0.0780 (18) 0.0583 (16) −0.0079 (14) 0.0130 (14) 0.0062 (13)
C19 0.0649 (14) 0.0479 (12) 0.0772 (16) −0.0198 (10) 0.0078 (11) −0.0195 (11)
C20 0.0471 (11) 0.0500 (12) 0.0617 (13) −0.0137 (8) −0.0027 (9) −0.0201 (10)
C21 0.0392 (10) 0.0445 (11) 0.0569 (12) −0.0049 (8) −0.0053 (8) −0.0027 (9)
C22 0.0583 (13) 0.0475 (12) 0.0694 (14) −0.0039 (9) −0.0121 (10) −0.0006 (10)
C23 0.0324 (9) 0.0438 (10) 0.0312 (10) −0.0034 (7) −0.0008 (7) −0.0086 (8)
C24 0.0368 (9) 0.0380 (10) 0.0355 (10) −0.0018 (7) −0.0026 (7) −0.0059 (8)
C25 0.0562 (12) 0.0446 (11) 0.0407 (11) −0.0013 (8) −0.0034 (9) −0.0021 (9)
C26 0.0654 (14) 0.0361 (11) 0.0685 (15) −0.0055 (9) −0.0002 (11) −0.0042 (10)
C27 0.0681 (14) 0.0443 (12) 0.0702 (16) −0.0089 (9) −0.0114 (11) −0.0213 (11)
C28 0.0883 (16) 0.0527 (13) 0.0496 (13) −0.0093 (11) −0.0188 (11) −0.0147 (10)
C29 0.0737 (14) 0.0408 (11) 0.0395 (11) −0.0107 (9) −0.0117 (9) −0.0043 (9)
C30 0.0349 (10) 0.0597 (12) 0.0387 (11) −0.0010 (8) −0.0053 (8) −0.0112 (9)
C31 0.0371 (11) 0.0869 (15) 0.0369 (11) 0.0045 (9) −0.0049 (8) −0.0139 (10)
C32 0.0602 (14) 0.129 (2) 0.0433 (14) −0.0190 (13) −0.0053 (11) −0.0173 (13)
C33 0.092 (2) 0.142 (3) 0.0416 (15) −0.0070 (18) −0.0130 (13) −0.0222 (15)
C34 0.075 (4) 0.148 (8) 0.030 (3) 0.011 (5) 0.008 (2) −0.001 (4)
C35 0.056 (2) 0.341 (12) 0.035 (2) −0.024 (5) 0.0031 (17) 0.025 (5)
C36 0.0525 (19) 0.244 (8) 0.0336 (18) −0.045 (4) −0.0036 (13) 0.004 (4)
C34A 0.075 (4) 0.148 (8) 0.030 (3) 0.011 (5) 0.008 (2) −0.001 (4)
C35A 0.056 (2) 0.341 (12) 0.035 (2) −0.024 (5) 0.0031 (17) 0.025 (5)
C36A 0.0525 (19) 0.244 (8) 0.0336 (18) −0.045 (4) −0.0036 (13) 0.004 (4)
N1 0.0375 (8) 0.0483 (9) 0.0431 (9) −0.0001 (6) 0.0002 (6) −0.0089 (7)
N2 0.0311 (9) 0.0633 (11) 0.0344 (9) −0.0083 (7) 0.0000 (7) −0.0039 (7)
N3 0.0358 (8) 0.0381 (8) 0.0388 (8) −0.0082 (6) −0.0018 (6) −0.0098 (6)
N4 0.0307 (8) 0.0575 (10) 0.0313 (8) −0.0034 (7) −0.0017 (6) −0.0088 (7)
O1 0.0799 (11) 0.0464 (9) 0.0908 (12) 0.0007 (7) −0.0088 (9) −0.0186 (8)
O2 0.0414 (9) 0.184 (2) 0.0517 (10) −0.0374 (10) −0.0043 (7) −0.0024 (11)
O3 0.0682 (10) 0.0396 (8) 0.0784 (11) −0.0026 (6) −0.0007 (8) −0.0117 (7)
O4 0.0316 (8) 0.1312 (14) 0.0459 (8) −0.0037 (7) −0.0032 (6) −0.0174 (9)

Geometric parameters (Å, °)

C1—O1 1.416 (2) C20—H20A 0.9700
C1—C2 1.508 (3) C20—H20B 0.9700
C1—H1A 0.9700 C21—N3 1.455 (2)
C1—H1B 0.9700 C21—C22 1.506 (3)
C2—N1 1.459 (2) C21—H21A 0.9700
C2—H2A 0.9700 C21—H21B 0.9700
C2—H2B 0.9700 C22—O3 1.420 (2)
C3—N1 1.460 (2) C22—H22A 0.9700
C3—C4 1.502 (3) C22—H22B 0.9700
C3—H3A 0.9700 C23—N3 1.452 (2)
C3—H3B 0.9700 C23—N4 1.461 (2)
C4—O1 1.416 (3) C23—C24 1.520 (2)
C4—H4A 0.9700 C23—H23 0.9800
C4—H4B 0.9700 C24—C25 1.381 (2)
C5—N1 1.448 (2) C24—C29 1.385 (2)
C5—N2 1.460 (2) C25—C26 1.378 (3)
C5—C6 1.524 (3) C25—H25 0.9300
C5—H5 0.9800 C26—C27 1.368 (3)
C6—C11 1.375 (3) C26—H26 0.9300
C6—C7 1.385 (3) C27—C28 1.368 (3)
C7—C8 1.374 (3) C27—H27 0.9300
C7—H7 0.9300 C28—C29 1.381 (3)
C8—C9 1.362 (4) C28—H28 0.9300
C8—H8 0.9300 C29—H29 0.9300
C9—C10 1.363 (3) C30—O4 1.229 (2)
C9—H9 0.9300 C30—N4 1.339 (2)
C10—C11 1.381 (3) C30—C31 1.491 (3)
C10—H10 0.9300 C31—C32 1.331 (3)
C11—H11 0.9300 C31—C36 1.376 (12)
C12—O2 1.219 (2) C31—C36A 1.424 (5)
C12—N2 1.330 (2) C32—C33 1.373 (3)
C12—C13 1.492 (3) C32—H32 0.9300
C13—C14 1.357 (3) C33—C34 1.15 (2)
C13—C18 1.369 (3) C33—C34A 1.392 (9)
C14—C15 1.408 (4) C33—H33 0.9300
C14—H14 0.9300 C34—C35 1.37 (2)
C15—C16 1.370 (5) C34—H34 0.9300
C15—H15 0.9300 C35—C36 1.334 (16)
C16—C17 1.334 (4) C35—H35 0.9300
C16—H16 0.9300 C36—H36 0.9300
C17—C18 1.379 (4) C34A—C35A 1.350 (11)
C17—H17 0.9300 C34A—H34A 0.9300
C18—H18 0.9300 C35A—C36A 1.403 (7)
C19—O3 1.422 (2) C35A—H35A 0.9300
C19—C20 1.500 (3) C36A—H36A 0.9300
C19—H19A 0.9700 N2—H2 0.832 (19)
C19—H19B 0.9700 N4—H4 0.855 (19)
C20—N3 1.454 (2)
O1—C1—C2 111.83 (17) N3—C21—H21B 109.9
O1—C1—H1A 109.3 C22—C21—H21B 109.9
C2—C1—H1A 109.3 H21A—C21—H21B 108.3
O1—C1—H1B 109.3 O3—C22—C21 111.62 (16)
C2—C1—H1B 109.3 O3—C22—H22A 109.3
H1A—C1—H1B 107.9 C21—C22—H22A 109.3
N1—C2—C1 109.40 (15) O3—C22—H22B 109.3
N1—C2—H2A 109.8 C21—C22—H22B 109.3
C1—C2—H2A 109.8 H22A—C22—H22B 108.0
N1—C2—H2B 109.8 N3—C23—N4 114.37 (13)
C1—C2—H2B 109.8 N3—C23—C24 111.98 (13)
H2A—C2—H2B 108.2 N4—C23—C24 112.06 (14)
N1—C3—C4 109.16 (17) N3—C23—H23 105.9
N1—C3—H3A 109.8 N4—C23—H23 105.9
C4—C3—H3A 109.8 C24—C23—H23 105.9
N1—C3—H3B 109.8 C25—C24—C29 117.87 (16)
C4—C3—H3B 109.8 C25—C24—C23 121.25 (15)
H3A—C3—H3B 108.3 C29—C24—C23 120.65 (15)
O1—C4—C3 111.84 (17) C26—C25—C24 120.91 (18)
O1—C4—H4A 109.2 C26—C25—H25 119.5
C3—C4—H4A 109.2 C24—C25—H25 119.5
O1—C4—H4B 109.2 C27—C26—C25 120.60 (19)
C3—C4—H4B 109.2 C27—C26—H26 119.7
H4A—C4—H4B 107.9 C25—C26—H26 119.7
N1—C5—N2 114.34 (14) C26—C27—C28 119.35 (19)
N1—C5—C6 111.81 (14) C26—C27—H27 120.3
N2—C5—C6 112.37 (15) C28—C27—H27 120.3
N1—C5—H5 105.8 C27—C28—C29 120.38 (19)
N2—C5—H5 105.8 C27—C28—H28 119.8
C6—C5—H5 105.8 C29—C28—H28 119.8
C11—C6—C7 117.72 (19) C28—C29—C24 120.88 (18)
C11—C6—C5 123.12 (16) C28—C29—H29 119.6
C7—C6—C5 119.05 (17) C24—C29—H29 119.6
C8—C7—C6 121.2 (2) O4—C30—N4 121.70 (16)
C8—C7—H7 119.4 O4—C30—C31 120.55 (15)
C6—C7—H7 119.4 N4—C30—C31 117.75 (15)
C9—C8—C7 120.2 (2) C32—C31—C36 109.8 (4)
C9—C8—H8 119.9 C32—C31—C36A 115.7 (2)
C7—C8—H8 119.9 C36—C31—C36A 47.6 (5)
C8—C9—C10 119.6 (2) C32—C31—C30 120.02 (18)
C8—C9—H9 120.2 C36—C31—C30 119.3 (4)
C10—C9—H9 120.2 C36A—C31—C30 122.4 (2)
C9—C10—C11 120.5 (2) C31—C32—C33 122.3 (2)
C9—C10—H10 119.8 C31—C32—H32 118.8
C11—C10—H10 119.8 C33—C32—H32 118.8
C6—C11—C10 120.8 (2) C34—C33—C32 118.1 (10)
C6—C11—H11 119.6 C34—C33—C34A 25.3 (11)
C10—C11—H11 119.6 C32—C33—C34A 121.5 (4)
O2—C12—N2 121.92 (17) C34—C33—H33 121.0
O2—C12—C13 120.76 (16) C32—C33—H33 121.0
N2—C12—C13 117.31 (16) C34A—C33—H33 111.7
C14—C13—C18 119.0 (2) C33—C34—C35 123.9 (17)
C14—C13—C12 120.5 (2) C33—C34—H34 118.1
C18—C13—C12 120.4 (2) C35—C34—H34 118.1
C13—C14—C15 120.1 (3) C36—C35—C34 117.6 (13)
C13—C14—H14 120.0 C36—C35—H35 121.2
C15—C14—H14 120.0 C34—C35—H35 121.2
C16—C15—C14 119.1 (3) C35—C36—C31 118.8 (10)
C16—C15—H15 120.4 C35—C36—H36 120.6
C14—C15—H15 120.4 C31—C36—H36 120.6
C17—C16—C15 120.6 (3) C35A—C34A—C33 117.0 (6)
C17—C16—H16 119.7 C35A—C34A—H34A 121.5
C15—C16—H16 119.7 C33—C34A—H34A 121.5
C16—C17—C18 120.3 (3) C34A—C35A—C36A 121.2 (5)
C16—C17—H17 119.9 C34A—C35A—H35A 119.4
C18—C17—H17 119.9 C36A—C35A—H35A 119.4
C13—C18—C17 120.9 (3) C35A—C36A—C31 120.1 (4)
C13—C18—H18 119.5 C35A—C36A—H36A 119.9
C17—C18—H18 119.5 C31—C36A—H36A 119.9
O3—C19—C20 111.83 (16) C5—N1—C2 116.27 (13)
O3—C19—H19A 109.2 C5—N1—C3 113.02 (14)
C20—C19—H19A 109.2 C2—N1—C3 109.35 (15)
O3—C19—H19B 109.2 C12—N2—C5 121.87 (15)
C20—C19—H19B 109.2 C12—N2—H2 118.1 (13)
H19A—C19—H19B 107.9 C5—N2—H2 118.9 (13)
N3—C20—C19 109.53 (16) C23—N3—C20 112.69 (13)
N3—C20—H20A 109.8 C23—N3—C21 115.67 (13)
C19—C20—H20A 109.8 C20—N3—C21 109.49 (14)
N3—C20—H20B 109.8 C30—N4—C23 121.95 (15)
C19—C20—H20B 109.8 C30—N4—H4 119.0 (12)
H20A—C20—H20B 108.2 C23—N4—H4 119.0 (12)
N3—C21—C22 109.04 (15) C4—O1—C1 109.36 (17)
N3—C21—H21A 109.9 C22—O3—C19 109.97 (14)
C22—C21—H21A 109.9
O1—C1—C2—N1 −58.3 (2) C36A—C31—C32—C33 17.0 (5)
N1—C3—C4—O1 59.2 (2) C30—C31—C32—C33 −178.5 (2)
N1—C5—C6—C11 −142.89 (17) C31—C32—C33—C34 20.9 (12)
N2—C5—C6—C11 −12.8 (2) C31—C32—C33—C34A −8.1 (6)
N1—C5—C6—C7 41.1 (2) C32—C33—C34—C35 −3(2)
N2—C5—C6—C7 171.26 (16) C34A—C33—C34—C35 102 (4)
C11—C6—C7—C8 0.4 (3) C33—C34—C35—C36 3(3)
C5—C6—C7—C8 176.60 (19) C34—C35—C36—C31 −19 (2)
C6—C7—C8—C9 −0.7 (4) C32—C31—C36—C35 32.9 (13)
C7—C8—C9—C10 0.4 (4) C36A—C31—C36—C35 −74.3 (12)
C8—C9—C10—C11 0.1 (3) C30—C31—C36—C35 177.1 (10)
C7—C6—C11—C10 0.1 (3) C34—C33—C34A—C35A −94 (3)
C5—C6—C11—C10 −175.94 (17) C32—C33—C34A—C35A −4.0 (10)
C9—C10—C11—C6 −0.3 (3) C33—C34A—C35A—C36A 5.8 (12)
O2—C12—C13—C14 −63.2 (3) C34A—C35A—C36A—C31 3.5 (11)
N2—C12—C13—C14 116.4 (2) C32—C31—C36A—C35A −14.8 (7)
O2—C12—C13—C18 113.7 (3) C36—C31—C36A—C35A 79.2 (9)
N2—C12—C13—C18 −66.6 (3) C30—C31—C36A—C35A −178.9 (5)
C18—C13—C14—C15 0.4 (4) N2—C5—N1—C2 −65.13 (19)
C12—C13—C14—C15 177.4 (2) C6—C5—N1—C2 63.99 (19)
C13—C14—C15—C16 −1.9 (4) N2—C5—N1—C3 62.6 (2)
C14—C15—C16—C17 2.0 (5) C6—C5—N1—C3 −168.34 (15)
C15—C16—C17—C18 −0.6 (5) C1—C2—N1—C5 −173.23 (15)
C14—C13—C18—C17 1.0 (4) C1—C2—N1—C3 57.3 (2)
C12—C13—C18—C17 −176.0 (2) C4—C3—N1—C5 171.06 (17)
C16—C17—C18—C13 −0.9 (4) C4—C3—N1—C2 −57.7 (2)
O3—C19—C20—N3 −57.9 (2) O2—C12—N2—C5 −2.3 (3)
N3—C21—C22—O3 58.8 (2) C13—C12—N2—C5 178.09 (16)
N3—C23—C24—C25 158.18 (15) N1—C5—N2—C12 −128.73 (18)
N4—C23—C24—C25 28.1 (2) C6—C5—N2—C12 102.44 (19)
N3—C23—C24—C29 −27.4 (2) N4—C23—N3—C20 −66.05 (18)
N4—C23—C24—C29 −157.45 (16) C24—C23—N3—C20 165.10 (14)
C29—C24—C25—C26 −0.6 (3) N4—C23—N3—C21 60.98 (18)
C23—C24—C25—C26 173.99 (17) C24—C23—N3—C21 −67.87 (18)
C24—C25—C26—C27 0.6 (3) C19—C20—N3—C23 −171.53 (15)
C25—C26—C27—C28 0.1 (3) C19—C20—N3—C21 58.23 (19)
C26—C27—C28—C29 −0.8 (3) C22—C21—N3—C23 172.89 (15)
C27—C28—C29—C24 0.8 (3) C22—C21—N3—C20 −58.5 (2)
C25—C24—C29—C28 −0.1 (3) O4—C30—N4—C23 2.9 (3)
C23—C24—C29—C28 −174.71 (18) C31—C30—N4—C23 −176.67 (16)
O4—C30—C31—C32 −5.8 (3) N3—C23—N4—C30 110.43 (18)
N4—C30—C31—C32 173.7 (2) C24—C23—N4—C30 −120.76 (18)
O4—C30—C31—C36 −146.4 (7) C3—C4—O1—C1 −58.9 (2)
N4—C30—C31—C36 33.2 (7) C2—C1—O1—C4 58.3 (2)
O4—C30—C31—C36A 157.7 (4) C21—C22—O3—C19 −57.6 (2)
N4—C30—C31—C36A −22.7 (4) C20—C19—O3—C22 57.2 (2)
C36—C31—C32—C33 −34.5 (7)

Hydrogen-bond geometry (Å, °)

D—H···A D—H H···A D···A D—H···A
N4—H4···O2 0.85 (2) 2.11 (2) 2.932 (2) 163.5 (17)
N2—H2···O4i 0.832 (19) 2.10 (2) 2.918 (2) 166.5 (17)

Symmetry codes: (i) x+1, y, z.

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: HB2906).

References

  1. Bruker (1999). SADABS Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Bruker (2004). APEX2 and SAINT-Plus Bruker AXS Inc., Madison, Wisconsin, USA.
  3. Carbonnelle, D., Ebstein, F., Rabu, C., Petit, J. Y., Gregoire, M. & Lang, F. (2005). Eur. J. Immunol.35, 546–556. [DOI] [PubMed]
  4. Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc.97, 1354–1358.
  5. Farrugia, L. J. (1997). J. Appl. Cryst.30, 565.
  6. Hatzelmann, A. & Schudt, C. (2001). J. Pharmacol. Exp. Ther.297, 267–279. [PubMed]
  7. Li, Z. C., Liu, C. L. & Liu, W. C. (1998). US Patent No. 6 020 332.
  8. Malik, I., Sedlarova, E., Andriamainty, F. & Csöllei, J. (2006). Farmaceut. Obzor.75, 3–9.
  9. Sedavkina, V. A., Lizak, I. V., Kulikova, L. K. & Ostroumova, E. E. (1984). Zh. Khim. Farm.1, 54–56.
  10. Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
  11. Simonini, M. V., Camargo, L. M., Dong, E., Maloku, E., Veldic, M., Costa, E. & Guidotti, A. (2006). Proc. Natl Acad. Sci. USA, 103, 1587–1592. [DOI] [PMC free article] [PubMed]
  12. Suzuki, K., Nagasawa, H., Uto, Y., Sugimoto, Y., Noguchi, K., Wakida, M., Wierzba, K., Terada, T., Asao, T., Yamada, Y., Kitazato, K. & Hori, H. (2005). Bioorg. Med. Chem.13, 4014–4021. [DOI] [PubMed]
  13. Zhou, Y., Xu, L., Wu, Y. & Liu, B. (1999). Chemom. Intell. Lab. Syst.45, 95–100.

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809005327/hb2906sup1.cif

e-65-0o578-sup1.cif (30.1KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809005327/hb2906Isup2.hkl

e-65-0o578-Isup2.hkl (351.3KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Structure Reports Online are provided here courtesy of International Union of Crystallography

RESOURCES