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Acta Crystallographica Section E: Structure Reports Online logoLink to Acta Crystallographica Section E: Structure Reports Online
. 2009 Aug 8;65(Pt 9):o2119. doi: 10.1107/S1600536809030864

2,5-Bis(5-bromo-2-thien­yl)thio­phene

Mamoun M Bader a,*
PMCID: PMC2970117  PMID: 21577534

Abstract

In the crystal structure of the title compound, C12H6Br2S3, the mol­ecules are planar (r.m.s. deviation = 0.06 Å). Consecutive mol­ecules do not stack in a planar fashion. There is an angle of 81.7 (12)° between the planes of the closest mol­ecules.

Related literature

For related structures, see: Pyrka et al. (1988). For literature related to synthesis, see: Hoffmann & Carlsen (1999); Mei et al. (2009). For a recent review of oligothio­phenes, see: Mishra et al. (2009).graphic file with name e-65-o2119-scheme1.jpg

Experimental

Crystal data

  • C12H6Br2S3

  • M r = 406.17

  • Orthorhombic, Inline graphic

  • a = 7.6216 (16) Å

  • b = 30.003 (6) Å

  • c = 5.8841 (13) Å

  • V = 1345.5 (5) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 6.46 mm−1

  • T = 173 K

  • 0.37 × 0.24 × 0.10 mm

Data collection

  • Siemens SMART Platform CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ) T min = 0.184, T max = 0.524

  • 9565 measured reflections

  • 3045 independent reflections

  • 2818 reflections with I > 2σ(I)

  • R int = 0.035

Refinement

  • R[F 2 > 2σ(F 2)] = 0.053

  • wR(F 2) = 0.114

  • S = 1.25

  • 3045 reflections

  • 155 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 1.24 e Å−3

  • Δρmin = −0.62 e Å−3

  • Absolute structure: Flack (1983), 1341 Friedel pairs

  • Flack parameter: 0.00 (7)

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ); molecular graphics: SHELXTL (Sheldrick, 2008b ); software used to prepare material for publication: SHELXTL.

Supplementary Material

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809030864/ng2619sup1.cif

e-65-o2119-sup1.cif (15.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809030864/ng2619Isup2.hkl

e-65-o2119-Isup2.hkl (152.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report

Acknowledgments

This work was supported in part by Research Development Grants from the Pennsylvania State University and partially by the MRSEC Program of the National Science Foundation under Award Number DMR-0819885. The author also acknowledges William W. Brennessel, Lindsay M. Hinkle, Victor G. Young Jr and the X-Ray Crystallographic Laboratory at the University of Minnesota.

supplementary crystallographic information

Comment

Dibromothiophenes are important building blocks in materials chemistry. They are mainly used in the prepartaion of various thiophene oligomers and polymers utilizing coupling reactions such as Stille and Suzuki couplings.

For literature related to the synthesis see: Hoffman & Carlsen (1999) and Mei (2009). For a recent review on synthesis and applications of oligothiophenes,see: Mishra (2009).

Experimental

Synthesis was carried out following literature procedures (Hoffman) as follows: to a a solution of terthiophene dissolved in chloroform was added 2 equivalents of N-bromosuccinimde and the reaction mixture was stirred at room temperature for 2 h. The reaction mixture was then extracted with water and product obtained by evaporation of chloroform and recrystallized twice from hexanes. The crystals were very thin, hence the large number in the second weighting scheme.

Refinement

The structure was solved using SHELXS97 and refined using SHELXL97 (Sheldrick, 2008). The space group Pcc2 was determined based on systematic absences and intensity statistics. A direct-methods solution was calculated which provided most non-hydrogen atoms from the E-map. Full-matrix least squares / difference Fourier cycles were performed which located the remaining non-hydrogen atoms. All non-hydrogen atoms were refined with anisotropic displacement parameters. All hydrogen atoms were placed in ideal positions and refined as riding atoms with relative isotropic displacement parameters. The final full matrix least squares refinement converged to R1 = 0.0527 and wR2 = 0.1169 (F2, all data).

Figures

Fig. 1.

Fig. 1.

2,5-bis(5-bromothiophen-2-yl)thiophene.

Fig. 2.

Fig. 2.

Crystal packing viewed along the a axis.

Crystal data

C12H6Br2S3 F(000) = 784
Mr = 406.17 Dx = 2.005 Mg m3
Orthorhombic, Pcc2 Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2 -2c Cell parameters from 903 reflections
a = 7.6216 (16) Å θ = 2.7–27.5°
b = 30.003 (6) Å µ = 6.46 mm1
c = 5.8841 (13) Å T = 173 K
V = 1345.5 (5) Å3 Plate, pale yellow
Z = 4 0.37 × 0.24 × 0.10 mm

Data collection

Siemens SMART Platform CCD diffractometer 3045 independent reflections
Radiation source: fine-focus sealed tube 2818 reflections with I > 2σ(I)
graphite Rint = 0.035
ω scans θmax = 27.5°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a) h = −9→9
Tmin = 0.184, Tmax = 0.524 k = −38→38
9565 measured reflections l = −7→7

Refinement

Refinement on F2 Secondary atom site location: difference Fourier map
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.053 H-atom parameters constrained
wR(F2) = 0.114 w = 1/[σ2(Fo2) + (0.0403P)2 + 2.9087P] where P = (Fo2 + 2Fc2)/3
S = 1.25 (Δ/σ)max = 0.001
3045 reflections Δρmax = 1.24 e Å3
155 parameters Δρmin = −0.62 e Å3
1 restraint Absolute structure: Flack (1983), 1341 Friedel pairs
Primary atom site location: structure-invariant direct methods Flack parameter: 0.00 (7)

Special details

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The structure refined as a merohedral inversion twin, whose mass ratio converged to 61:39.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Br1 0.69877 (9) 0.96042 (2) 1.02236 (11) 0.0374 (2)
Br2 0.71126 (13) 0.54014 (2) 0.07093 (13) 0.0532 (3)
S1 0.6713 (2) 0.86007 (5) 0.9031 (3) 0.0271 (3)
S2 0.81817 (19) 0.76622 (5) 0.3646 (3) 0.0232 (3)
S3 0.6749 (2) 0.62433 (5) 0.3757 (3) 0.0279 (3)
C1 0.7418 (8) 0.9124 (2) 0.8288 (11) 0.0253 (13)
C2 0.8278 (8) 0.9124 (2) 0.6263 (12) 0.0287 (14)
H2 0.8761 0.9384 0.5584 0.034*
C3 0.8376 (7) 0.86976 (19) 0.5284 (11) 0.0238 (12)
H3 0.8933 0.8642 0.3868 0.029*
C4 0.7597 (7) 0.8370 (2) 0.6553 (10) 0.0215 (12)
C5 0.7360 (7) 0.7908 (2) 0.6122 (10) 0.0172 (12)
C6 0.6539 (7) 0.75937 (18) 0.7416 (10) 0.0197 (12)
H6 0.6009 0.7660 0.8838 0.024*
C7 0.6546 (7) 0.71661 (19) 0.6471 (10) 0.0201 (12)
H7 0.6016 0.6916 0.7182 0.024*
C8 0.7397 (8) 0.71439 (19) 0.4407 (12) 0.0190 (12)
C9 0.7621 (7) 0.67576 (19) 0.2972 (10) 0.0175 (11)
C10 0.8467 (8) 0.6726 (2) 0.0932 (10) 0.0233 (12)
H10 0.9036 0.6972 0.0231 0.028*
C11 0.8421 (8) 0.62914 (19) −0.0055 (11) 0.0249 (12)
H11 0.8927 0.6216 −0.1479 0.030*
C12 0.7553 (9) 0.5999 (2) 0.1323 (12) 0.0269 (13)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Br1 0.0447 (4) 0.0317 (4) 0.0359 (4) 0.0053 (3) 0.0051 (4) −0.0089 (3)
Br2 0.0814 (7) 0.0272 (4) 0.0512 (7) −0.0077 (4) 0.0045 (5) −0.0099 (4)
S1 0.0315 (8) 0.0282 (7) 0.0217 (8) −0.0025 (6) 0.0079 (6) −0.0021 (6)
S2 0.0252 (7) 0.0259 (7) 0.0185 (7) −0.0031 (6) 0.0045 (6) 0.0006 (6)
S3 0.0338 (8) 0.0234 (7) 0.0263 (8) −0.0046 (6) 0.0066 (7) 0.0012 (7)
C1 0.028 (3) 0.025 (3) 0.023 (3) 0.002 (2) −0.005 (3) −0.003 (3)
C2 0.023 (3) 0.029 (3) 0.035 (3) −0.002 (2) −0.003 (3) 0.009 (3)
C3 0.026 (3) 0.024 (3) 0.021 (3) 0.000 (2) 0.006 (3) 0.004 (3)
C4 0.018 (3) 0.030 (3) 0.017 (3) 0.003 (2) 0.000 (2) 0.000 (2)
C5 0.012 (3) 0.026 (3) 0.013 (3) −0.001 (2) −0.003 (2) −0.004 (2)
C6 0.019 (3) 0.023 (3) 0.017 (3) −0.001 (2) −0.001 (2) 0.001 (2)
C7 0.012 (3) 0.026 (3) 0.022 (3) 0.000 (2) −0.001 (2) 0.005 (2)
C8 0.014 (2) 0.017 (3) 0.026 (3) −0.002 (2) 0.004 (2) 0.010 (2)
C9 0.016 (3) 0.015 (3) 0.021 (3) 0.002 (2) −0.001 (2) 0.000 (2)
C10 0.020 (3) 0.029 (3) 0.021 (3) 0.002 (2) −0.001 (2) 0.003 (2)
C11 0.028 (3) 0.023 (3) 0.024 (3) 0.005 (2) 0.004 (3) −0.006 (2)
C12 0.035 (3) 0.022 (3) 0.024 (3) −0.004 (3) 0.000 (3) −0.006 (3)

Geometric parameters (Å, °)

Br1—C1 1.864 (6) C4—C5 1.419 (8)
Br2—C12 1.858 (6) C5—C6 1.365 (8)
S1—C1 1.717 (7) C6—C7 1.398 (8)
S1—C4 1.749 (6) C6—H6 0.9500
S2—C8 1.725 (6) C7—C8 1.379 (9)
S2—C5 1.750 (6) C7—H7 0.9500
S3—C12 1.722 (7) C8—C9 1.444 (8)
S3—C9 1.742 (6) C9—C10 1.366 (8)
C1—C2 1.360 (10) C10—C11 1.428 (8)
C2—C3 1.404 (9) C10—H10 0.9500
C2—H2 0.9500 C11—C12 1.367 (9)
C3—C4 1.370 (8) C11—H11 0.9500
C3—H3 0.9500
C1—S1—C4 91.7 (3) C7—C6—H6 122.9
C8—S2—C5 92.3 (3) C8—C7—C6 113.4 (5)
C12—S3—C9 91.2 (3) C8—C7—H7 123.3
C2—C1—S1 111.9 (5) C6—C7—H7 123.3
C2—C1—Br1 128.4 (5) C7—C8—C9 127.6 (5)
S1—C1—Br1 119.8 (4) C7—C8—S2 110.4 (5)
C1—C2—C3 112.7 (6) C9—C8—S2 122.1 (5)
C1—C2—H2 123.6 C10—C9—C8 128.7 (5)
C3—C2—H2 123.6 C10—C9—S3 110.6 (4)
C4—C3—C2 114.0 (6) C8—C9—S3 120.7 (4)
C4—C3—H3 123.0 C9—C10—C11 114.2 (6)
C2—C3—H3 123.0 C9—C10—H10 122.9
C3—C4—C5 131.2 (5) C11—C10—H10 122.9
C3—C4—S1 109.7 (5) C12—C11—C10 110.9 (5)
C5—C4—S1 119.1 (4) C12—C11—H11 124.5
C6—C5—C4 129.3 (5) C10—C11—H11 124.5
C6—C5—S2 109.7 (4) C11—C12—S3 113.0 (5)
C4—C5—S2 121.0 (4) C11—C12—Br2 126.3 (5)
C5—C6—C7 114.3 (5) S3—C12—Br2 120.6 (4)
C5—C6—H6 122.9
C4—S1—C1—C2 0.0 (5) C6—C7—C8—C9 −179.1 (6)
C4—S1—C1—Br1 −179.1 (4) C6—C7—C8—S2 −0.3 (6)
S1—C1—C2—C3 0.1 (7) C5—S2—C8—C7 0.0 (5)
Br1—C1—C2—C3 179.1 (5) C5—S2—C8—C9 179.0 (5)
C1—C2—C3—C4 −0.2 (8) C7—C8—C9—C10 −179.5 (6)
C2—C3—C4—C5 177.2 (6) S2—C8—C9—C10 1.8 (9)
C2—C3—C4—S1 0.2 (7) C7—C8—C9—S3 0.8 (9)
C1—S1—C4—C3 −0.1 (5) S2—C8—C9—S3 −178.0 (3)
C1—S1—C4—C5 −177.6 (5) C12—S3—C9—C10 0.2 (5)
C3—C4—C5—C6 −178.4 (7) C12—S3—C9—C8 180.0 (5)
S1—C4—C5—C6 −1.6 (9) C8—C9—C10—C11 −179.2 (6)
C3—C4—C5—S2 2.0 (9) S3—C9—C10—C11 0.6 (7)
S1—C4—C5—S2 178.8 (3) C9—C10—C11—C12 −1.3 (8)
C8—S2—C5—C6 0.2 (5) C10—C11—C12—S3 1.4 (7)
C8—S2—C5—C4 179.8 (5) C10—C11—C12—Br2 178.2 (5)
C4—C5—C6—C7 −180.0 (5) C9—S3—C12—C11 −1.0 (5)
S2—C5—C6—C7 −0.4 (7) C9—S3—C12—Br2 −177.9 (4)
C5—C6—C7—C8 0.4 (7)

Footnotes

Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: NG2619).

References

  1. Bruker (2001). SMART and SAINT Bruker AXS Inc., Madison, Wisconsin, USA.
  2. Flack, H. D. (1983). Acta Cryst. A39, 876–881.
  3. Hoffmann, K. J. & Carlsen, H. J. (1999). Synth. Commun.29, 1607–1610.
  4. Mei, J., Heston, N. C., Vasilyeva, S. V. & Reynolds, J. R. (2009). Macromolecules, 42, 1482–1487.
  5. Mishra, A., Ma, C. & Buerle, P. (2009). Chem. Rev.109, 1141–1276. [DOI] [PubMed]
  6. Pyrka, G. J., Fernando, Q., Inoue, M. B., Inoue, M. & Velazquez, E. F. (1988). Acta Cryst. C44, 562–564.
  7. Sheldrick, G. M. (2008a). SADABS. University of Göttingen, Germany.
  8. Sheldrick, G. M. (2008b). Acta Cryst. A64, 112–122. [DOI] [PubMed]

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809030864/ng2619sup1.cif

e-65-o2119-sup1.cif (15.4KB, cif)

Structure factors: contains datablocks I. DOI: 10.1107/S1600536809030864/ng2619Isup2.hkl

e-65-o2119-Isup2.hkl (152.4KB, hkl)

Additional supplementary materials: crystallographic information; 3D view; checkCIF report


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