Table 1. Percentage of M. marinum and M. ulcerans strains containing selected M. ulcerans Agy99 sequences.
CDS | % MMb strains | % MUc strains | % MUc African strains | CDS | % MUc strains | % MUc African strains |
MUL_0027 | 3.7 | - | - | MUP002 | 100 | 100 |
MUL_0076 | 51.8 | - | - | MUP003 | 100 | 100 |
MUL_0503 | 92.6 | - | - | MUP004 | 100 | 100 |
MUL_0508 | 0 | 88.5 | 100 | MUP006 | 80.8 | 100 |
MUL_0510 | 0 | 88.5 | 100 | MUP007 | 92.3 | 100 |
MUL_0511 | 0 | 92.3 | 100 | MUP013 | 92.3 | 100 |
MUL_0512 | 0 | 84.6 | 100 | MUP014 | 88.5 | 100 |
MUL_0513 | 0 | 84.6 | 100 | MUP015 | 96.2 | 100 |
MUL_0515 | 0 | 76.9 | 100 | MUP016 | 80.8 | 100 |
MUL_0516 | 0 | 88.5 | 100 | MUP017 | 61.5 | 100 |
MUL_0517 | 0 | 96.2 | 100 | MUP018 | 80.8 | 100 |
MUL_0526 | 29.6 | - | - | MUP019 | 73.1 | 100 |
MUL_0527 | 48.1 | - | - | MUP020 | 80.8 | 100 |
MUL_0551 | 0 | 73.1 | 100 | MUP021 | 88.5 | 100 |
MUL_0552 | 0 | 88.5 | 100 | MUP023 | 100 | 100 |
MUL_0998 | 0 | 92.3 | 100 | MUP024 | 100 | 100 |
MUL_0999 | 0 | 92.3 | 100 | MUP038 | 92.3 | 90 |
MUL_1001 | 0 | 92.3 | 100 | MUP045 | 100 | 100 |
MUL_1135 | 7.5 | - | - | MUP046 | 96.2 | 100 |
MUL_2590 | 44.4 | - | - | MUP057 | 46.2 | 100 |
MUL_2831 | 0 | 100 | 100 | MUP064 | 46.2 | 100 |
MUL_2832 | 0 | 96.2 | 100 | MUP065 | 53.8 | 100 |
MUL_3210 | 74.1 | - | - | MUP066 | 88.5 | 100 |
MUL_3212 | 0 | 100 | 100 | MUP067 | 73.1 | 100 |
MUL_3214 | 0 | 96.2 | 100 | MUP068 | 65.4 | 100 |
MUL_3215 | 0 | 92.3 | 100 | MUP070 | 65.4 | 100 |
MUL_3216 | 0 | 96.2 | 100 | MUP071 | 88.5 | 100 |
MUL_3217 | 0 | 100 | 100 | MUP074 | 88.5 | 100 |
MUL_3218 | 0 | 69.2 | 100 | MUP075 | 88.5 | 100 |
MUL_3230 | 0 | 100 | 100 | MUP076 | 84.6 | 100 |
MUL_3440 | 66.6 | - | - | MUP078 | 92.3 | 100 |
MUL_3828 | 0 | 69.2 | 100 | MUP079 | 92.3 | 100 |
MUL_4213 | 44.4 | - | - | MUP080 | 96.2 | 100 |
MUL_4217 | 44.4 | - | - | PKS domainsa | 100 | 100 |
= All sequences encoding the 12 PKS domains are found in 100% of mycolactone producing mycobacteria.
= M. marinum;
= M. ulcerans.