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. 2010 Mar 9;78(8):1950–1958. doi: 10.1002/prot.22711

Table I.

List of Modified Parameters for the χ1 and χ2 Torsion Potentials in Selected Amino Acids of the Amber ff99SB Force Field

Res. Angle θ0 k1 k2 k3 k4 k5 k6
Ile N–Cα–Cβ–Cγ2 0.0 0.195 −0.846
Leu C–Cα–Cβ–Cγ 0.0 0.571 −0.358 0.135
Asp N–Cα–Cβ–Cγ 0.0 −2.635 −1.190 −0.007 0.423 0.232 −0.213
Cα–Cβ–Cγ–Oδ1,2 0.0 0.0 −0.443 0.0 −0.138 0.0 −0.013
Asn C–Cα–Cβ–Cγ 0.0 0.571 −0.596 0.118 −0.417 0.104 −0.101
Cα–Cβ–Cγ–Nδ 0.0 −1.046 −0.181 −0.035 0.100 0.130 −0.106

The parameters are in kcal mol−1 and correspond to the torsion potentials that are defined in the main text. Note that for the χ2 torsion in Asp, the correction is applied to both side-chain oxygen atoms.