Table 1.

List of bacterial genera whose abundances differ statistically at the 1% level of confidence between the BB-DR and BB-DP stool samples

Approximate genus level: 95% similarity to closest cultured relative	Phyla	% of all BB-DP reads	% of all BB-DR reads	P-value	Fold difference
Bacteroides	Bacteroidetes	6.732	6.101	2.00E–05	1.5
Bifidobacterium	Actinobacteria	0.041	0.940	2.00E−05	16.8
Eubacterium	Firmicutes	4.009	2.050	2.00E−05	2.6
Halothermothrix	Firmicutes	0.126	0.003	2.00E−05	55.0
Lactobacillus	Firmicutes	5.320	8.012	2.00E−05	1.1
Prevotella	Bacteroidetes	0.307	0.630	2.00E−05	1.5
Pseudobutyrivibrio	Firmicutes	0.112	0.453	2.00E−05	3.0
Ruminococcus	Firmicutes	2.302	1.675	2.00E−05	1.9
Spiroplasma	Mollicutes	0.000	0.112	2.00E−05	36
Anaerostipes	Firmicutes	0.127	0.0523	0.000680	3.2
Mucispirillum	Deferribacteres	0.224	0.130	0.000760	2.3
Butyrivibrio	Firmicutes	0.030	0.000	0.000980	13
Proteiniphilum	Bacteroidetes	0.062	0.143	0.001420	1.7
Streptococcus	Firmicutes	0.025	0.081	0.001700	2.4
Turicibacter	Firmicutes	0.654	0.909	0.002040	1.2
Pediococcus	Firmicutes	0.032	0.003	0.003080	14
Sporobacter	Firmicutes	1.396	1.262	0.007040	1.5
Bryantella	Firmicutes	0.838	1.089	0.009580	1.4
% of total reads		22.334	23.645

Abbreviations: BB-DP, bio-breeding diabetes-prone; BB-DR, bio-breeding diabetes-resistant.

The percent of total reads is shown for each genus. Those percent of read numbers in bold indicate the genotype (BB-DP or BB-DR), which is higher for that genus. Here a 16S rRNA sequence is considered to be derived from a known genus if it is at a similarity level of 95% or above to its closest cultured relative.