Table 1.
Protein | Source | PDBID | Resol.1 | # Res. | # HB | Avg HB E2 | RMSD3 | Seq Id4 |
---|---|---|---|---|---|---|---|---|
Oxidized structures | ||||||||
TRX | E. coli | 2TRX | 1.7 Å | 108 | 141 | −2.6 | 0.0 Å | 100 % |
TRX | S. aureus | 2O7K | 2.2 Å | 103 | 142 | −2.3 | 1.3 Å | 51 % |
TRX-m | Spinach cholorplast | 1FB6 | 2.1 Å | 104 | 130 | −2.4 | 1.0 Å | 48 % |
TRX-2 | Anabaena sp. | 1THX | 1.6 Å | 108 | 142 | −2.6 | 1.0 Å | 43 % |
TRX-2 | Human mitochondria | 1W4V | 1.8 Å | 107 | 142 | −2.5 | 1.2 Å | 38 % |
TRX-h | C. reinhardtii cytosol | 1EP7 | 2.1 Å | 112 | 142 | −2.5 | 1.4 Å | 36 % |
TRX-f | Spinach cholorplast | 1F9M | 1.9 Å | 112 | 148 | −2.5 | 1.4 Å | 32 % |
TRX | Fruit fly cytosol | 1XWA | 2.2 Å | 106 | 145 | −2.4 | 1.2 Å | 31 % |
TRX | Human cytosol | 1ERU | 2.1 Å | 105 | 146 | −2.4 | 1.3 Å | 27 % |
Reduced structures | ||||||||
TRX-2 | Human mitochondria | 1UVZ | 2.0 Å | 107 | 140 | −2.3 | 0.2 Å | 100 % |
TRX | Fruit fly cytosol | 1XWC | 2.3 Å | 106 | 141 | −2.3 | 0.5 Å | 100 % |
TRX | Human cytosol | 1ERT | 1.7 Å | 105 | 155 | −2.2 | 0.2 Å | 100 % |
The x-ray crystallographic resolution.
The average hydrogen bond energy (kcal/mol).
The α-carbon root mean square deviation comparing each structure to the E. coli homolog. In the case of the reduced TRXs, the comparison is to the oxidized state of the same homolog.
The pairwise percent residue identity comparing each sequence to the E. coli homolog. In the case of the reduced TRXs, the comparison is to its oxidized state.