Table 1. DNA primers and RNA and DNA templates.
Primers |
5′-CCTCTCGTAAAATATG-3′ |
5′-CCTCTCGTAAAATATGGC-3′ |
5′-CCTCTCGTAAAATATGGCC-3′ |
5′-CCTCTCGTAAAATATGGCCTCTTT-3′ |
Templatesa |
RNA 5 10 15 * ** * 30 35 |
3′-GGAGAGCAUUUUAUACCGGXGAAAUAAGAGGAAAU-5′ |
DNA 5 10 15 * ** * 30 35 |
3′-GGAGAGCATTTTATACCGGAGAAATAAGAGGAAAT-5′ |
aThe templates are derived from a hypervariable region of the extra-cellular region of the envelope gene of the WMJ-1 strain of HIV-1. Template positions that accept incoming bases in primer extension assays are in bold and denoted by an asterisk. In the RNA template, the X denotes adenosine or hypoxanthine.