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Characterization of significant transcriptional modules
| Transcriptional modules | 1 | 2 | 3 | 4 | 5 | 6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Number of genes | 97 | 45 | 34 | 71 | 14 | 54 | |||||||||
| Expression pattern in acute* | DD | UU | U | DD | U | D | UU | D | UU | DD | DD | UU | U | DD | U |
| Expression pattern in chronic* | D | UU | D | U | DD | U | UUUU | U | DD | U | DDDD | UU | DD | ||
*: Patterns consist of one-phase regulation (up-down/down-up), two-phase regulation (up-down-up/down-up-down) or simply up- or down-regulation. Details are listed in expression patterns in Additional File 2.
