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Simulated phenotypes
| “Genotype” |
Phenotype |
|||
|---|---|---|---|---|
| Latent variable | Causative polymorphism | Additive: |
or: |
xor: |
| βLC = 0 | βLC = −P | βLC = −2P | ||
| North | 0 | 0 | 0 | 0 |
| South | 0 | β | β | β |
| North | 1 | β | β | β |
| South | 1 | 2β | β | 0 |
Model is shown for generating phenotypes from data with one causative genetic locus and a nongenetic, geographic factor that is treated as a latent variable.
