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. Author manuscript; available in PMC: 2010 Nov 8.
Published in final edited form as: J Chem Theory Comput. 2007 Jan 1;3(1):156–169. doi: 10.1021/ct600085e

Figure 4.

Figure 4

Relative deviation from PB solvation energy for GBn and OBC GB for a series of snapshots from a denaturation trajectory of protein A. GBn has a tighter clustering of points, indicating less random error than OBC GB (stdev 6.4 vs 7.2 kcal/mol), while maintaining a similar native state bias (trend of points across the plot). Average errors of −9.2 (OBC GB) and 68.9 (GBn) kcal/mol removed to facilitate comparison.