Skip to main content
. Author manuscript; available in PMC: 2010 Nov 8.
Published in final edited form as: J Chem Theory Comput. 2007 Jan 1;3(1):156–169. doi: 10.1021/ct600085e

Figure 8.

Figure 8

Ubiquitin backbone hydrogen bond length data collected over 10 ns of MD for TIP3P explicit solvent, OBC GB and GBn. Plots represent difference between implicit and explicit solvent bond length distribution mean (left) and standard deviation (right) as a function of mean explicit solvent bond length. The zero line represents an exact match between the explicit and implicit solvent results. Hydrogen bond lengths under the GBn model are generally in better agreement with explicit solvent results.