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. Author manuscript; available in PMC: 2010 Nov 8.
Published in final edited form as: J Chem Theory Comput. 2007 Jan 1;3(1):156–169. doi: 10.1021/ct600085e

Figure 9.

Figure 9

Free energy surfaces at 300K for the backbone conformation of Ala5 in the Ala10 peptide calculated from 100ns of REMD. Energies are in kcal/mol, with the lowest free energy assigned a value of 0. TIP3P and GBn result in similar free energies for the α, β and polyproline II basins, while OBC GB shows a strong preference for α-helix.