Table 1. Major constituents of Ae. aegypti metagenome are listed below, with number of reads corresponding to each category as well as percentage of the total reads.

	5 infected, F		1/5 infected, F		5 noninfected, F		5 infected, M		5 infected, M
	N2173		N2175		N2187		N2473		N2474
	reads	% reads	reads	% reads	reads	% reads	reads	% reads	reads	% reads
Ae. aegypti rRNA	268,015	92.60	182,788	84.56	246,080	72.03	239,991	61.38	183,687	54.54
Ae. aegypti transcripts	2,353	0.81	2,268	1.05	15,559	4.55	1,915	0.49	4,574	1.36
Bacterial	8,567	2.96	12,663	5.86	14,656	4.29	39,615	10.13	22,119	6.57
Fungal	1,559	0.54	2,988	1.38	2,041	0.60	8,897	2.28	2,862	0.85
Other	8,942	3.09	15,457	7.15	63,314	18.53	100,553	25.72	123,580	36.69
Total reads	289,436		216,164		341,650		390,971		336,822

Number of reads corresponding to Ae. aegypti rRNA and Ae. aegypti transcripts were determined by BLAST and CLC workbench. Number of reads derived from bacteria and fungi were determined using MR-RAST RDP and MG-RAST SEED analysis, respectively.