TABLE III.

The main chain RMSD values of the loops sampled by RAPPER and by this work for the Fiser loop set.

Loop		RAPPERa		FALCm4b
Length	Targetsc	Rmind	Ravee	Rmind	Ravee
4	35	0.43	1.65	0.33	0.92
5	35	0.53	2.27	0.44	1.63
6	36	0.69	3.06	0.47	2.34
7	38	0.78	3.79	0.58	2.74
8	32	1.11	4.16	0.84	3.69
9	37	1.29	5.00	0.95	4.21
10	37	1.67	5.66	1.45	5.07
11	33	1.99	6.71	1.47	5.76
12	34	2.21	6.96	1.74	6.31

^aTaken from Table 3 of Ref. [7].

^bObtained from screening with the DFIRE-β potential after the four-fold sampling with fragment assembly, analytical loop closure, and Ramachandran minimization.

^cThe number of loop targets.

^dMinimum main-chain RMSD (in Å) averaged over the loop targets.

^eAverage main-chain RMSD (in Å) averaged over the loop targets.