Skip to main content
. 2010 Nov 11;5(11):e13933. doi: 10.1371/journal.pone.0013933

Table 8. Strains, plasmids, primers.

Strains, plasmids, primers Description Reference, source
Strain
3841 Rhizobium leguminosarum bv. viciae; Strr [33]
RU1721 braEF::ΩTc This study
RU1976 braEF::ΩTc aapQ P144D This study
RU1722 aapJQM::ΩSp braEF::ΩTc [1]
4292 Sym plasmid pRL2JI (phaseoli) derivative of 8401 bv. phaseoli, Strr [34]
RU2222 4292 with pLAFR1 This study
RU1809 aapJQM::ΩSp with pLAFR1 This study
RU1932 braE::TnphoA with pLAFR1 This study
RU1933 aapJQM::ΩSp braE::TnphoA with pLAFR1 This study
2011 2011, Strr derivative of Sinorhizobium meliloti J. Dénarié, France
2011mTn5STM.3.12.F11 livK(braC)::mTn5 [27]
2011mTn5STM.4.05.D04 livH(braD)::mTn5 [27]
LMB210 aapJ::ΩSp livK(braC)::mTn5 This study
LMB211 aapJ::ΩSp livH(braD)::mTn5 This study
Plasmid
pLAFR1 Wide-host-range mobilizable P-group cloning vector; Tcr [35]
pJQ200SK pACYC derivative, P15A origin of replication; Gmr [36]
pPH1JI P-group chaser plasmid [37]
pRU1247 aapJQMP region with AapQ P144D mutation on pJQ200SK This study
pRU410 aapJQM::ΩSp on pJQ200SK [25]
pBIO206 braE::TnphoA on pLAFR1 [25]
pJET1.2 Cloning vector Fermentas, Lithuania
pLMB111 Sm2011 2.6 kb aapJ fragment on pJET1.2 This study
pLMB112 aapJ deletion with BamHI site in pLMB111 This study
pLMB113 XbaI/XhoI fragment of pLMB112 cloned into pJQ200SK This study
pLMB118 ΩSp insertion into BamHI site of pLMB113 This study
Primer
p495 CACCACTAGTCATAGACCGAATCGACCAC
p441 AAACTAGTGGGTCTTTTCAAAGGATA
p418 GGGTCGCGAAACCAGACTTT
p419 CGCCGTACCACTTGTTCATG
pIS50R AGGTCACATGGAAGTCAGATC
p439 ATAGGGGCCGACACCGATGA
pr0163 GATTGCCGGAATATCCTGCA
pr0164 GCGGCAGACCGATGATCAGC
pr0165 TTTGGATCCTTTTTTGAACCTTTTCGGTT
pr0166 TTTGGATCCTGATCGGACGCTATGTCGGG
pOTforward CGGTTTACAAGCATAAAGC
pr0240 GCACGTGCGTCCCGCCGATC
pr0241 ACGATCTCGATCGACTGTCC

Str  =  streptinomycin; Tc  =  tetracycline; Sp  =  spectinomycin; Gm  =  gentamicin; BamHI sites in primers are underlined.