Table 8. Strains, plasmids, primers.
Strains, plasmids, primers | Description | Reference, source |
Strain | ||
3841 | Rhizobium leguminosarum bv. viciae; Strr | [33] |
RU1721 | braEF::ΩTc | This study |
RU1976 | braEF::ΩTc aapQ P144D | This study |
RU1722 | aapJQM::ΩSp braEF::ΩTc | [1] |
4292 | Sym plasmid pRL2JI (phaseoli) derivative of 8401 bv. phaseoli, Strr | [34] |
RU2222 | 4292 with pLAFR1 | This study |
RU1809 | aapJQM::ΩSp with pLAFR1 | This study |
RU1932 | braE::TnphoA with pLAFR1 | This study |
RU1933 | aapJQM::ΩSp braE::TnphoA with pLAFR1 | This study |
2011 | 2011, Strr derivative of Sinorhizobium meliloti | J. Dénarié, France |
2011mTn5STM.3.12.F11 | livK(braC)::mTn5 | [27] |
2011mTn5STM.4.05.D04 | livH(braD)::mTn5 | [27] |
LMB210 | aapJ::ΩSp livK(braC)::mTn5 | This study |
LMB211 | aapJ::ΩSp livH(braD)::mTn5 | This study |
Plasmid | ||
pLAFR1 | Wide-host-range mobilizable P-group cloning vector; Tcr | [35] |
pJQ200SK | pACYC derivative, P15A origin of replication; Gmr | [36] |
pPH1JI | P-group chaser plasmid | [37] |
pRU1247 | aapJQMP region with AapQ P144D mutation on pJQ200SK | This study |
pRU410 | aapJQM::ΩSp on pJQ200SK | [25] |
pBIO206 | braE::TnphoA on pLAFR1 | [25] |
pJET1.2 | Cloning vector | Fermentas, Lithuania |
pLMB111 | Sm2011 2.6 kb aapJ fragment on pJET1.2 | This study |
pLMB112 | aapJ deletion with BamHI site in pLMB111 | This study |
pLMB113 | XbaI/XhoI fragment of pLMB112 cloned into pJQ200SK | This study |
pLMB118 | ΩSp insertion into BamHI site of pLMB113 | This study |
Primer | ||
p495 | CACCACTAGTCATAGACCGAATCGACCAC | |
p441 | AAACTAGTGGGTCTTTTCAAAGGATA | |
p418 | GGGTCGCGAAACCAGACTTT | |
p419 | CGCCGTACCACTTGTTCATG | |
pIS50R | AGGTCACATGGAAGTCAGATC | |
p439 | ATAGGGGCCGACACCGATGA | |
pr0163 | GATTGCCGGAATATCCTGCA | |
pr0164 | GCGGCAGACCGATGATCAGC | |
pr0165 | TTTGGATCCTTTTTTGAACCTTTTCGGTT | |
pr0166 | TTTGGATCCTGATCGGACGCTATGTCGGG | |
pOTforward | CGGTTTACAAGCATAAAGC | |
pr0240 | GCACGTGCGTCCCGCCGATC | |
pr0241 | ACGATCTCGATCGACTGTCC |
Str = streptinomycin; Tc = tetracycline; Sp = spectinomycin; Gm = gentamicin; BamHI sites in primers are underlined.