Table 2.

Summary of Empirical Distributions of Minor-Allele Dosage for True Heterozygotes

Minor-Allele Count in Reference Haplotypes	Fraction of Heterozygote Minor-Allele Dosages
	<0.1	[0.1, 0.5)	[0.5, 0.9)	≥ 0.9
1	0.729	0.120	0.063	0.088
2	0.331	0.188	0.133	0.349
3	0.291	0.169	0.128	0.413
4	0.199	0.170	0.162	0.469
5	0.327	0.176	0.162	0.335
6	0.255	0.180	0.136	0.428
7	0.166	0.149	0.132	0.553
8	0.203	0.195	0.179	0.422
9	0.091	0.114	0.128	0.667
10	0.100	0.159	0.195	0.546
11–20	0.061	0.094	0.118	0.727
21–30	0.043	0.054	0.092	0.811
31–40	0.016	0.039	0.081	0.865
41–50	0.016	0.051	0.100	0.834
51–60	0.006	0.023	0.050	0.921
61–70	0.011	0.039	0.087	0.863
71–80	0.009	0.026	0.072	0.893
81–90	0.007	0.017	0.054	0.923
91–100	0.005	0.019	0.065	0.911

Each distribution is conditional on the indicated minor-allele count in the reference haplotypes. Here we report results for $N_{seq}=100$ sequenced cases and controls.