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. 2010 Nov 17;99(10):3445–3453. doi: 10.1016/j.bpj.2010.09.050

Table 1.

Computational results for the design of novel HIV-1 fusion inhibitors

Name Sequence selectionrank Fold specificityrank Approximate bindingaffinity rank Sequence
628 639
SQ044 44 29 1 Y CDYEDRYERW R
SQ435 435 15 2 W CDWRDEWERY R
SQ175 175 11 3 W ADWRDEWERY R
SQ486 486 20 4 Y MEYDERYDRW R
SQ323 323 17 5 Y WEYDDRYDRW R
SQ318 318 3 6 Y VEYDDRYDRW R
Native n/a n/a 7 W EEWDREIENY T
SQ321 321 2 8 Y LEYDDRYDRW R
SQ322 322 6 9 Y IEYDDRYDRW R
SQ457 457 1 10 W ADWRDEWDRY R