Table 3.
ALCHEMY versus BRLMM-P on 270 Human HapMap Phase II samples
ALCHEMY (%) | BRLMM-P (%) | |
---|---|---|
Accuracy | 99.78 | 99.82 |
Call rate | 98.82 | 99.19 |
Accuracy refers to the agreement between genotype calls for the respective algorithm and HapMap Phase II published genotypes.