Database table
|
Purpose
|
Number of entries
|
| uid |
Records unique identifier
for sequences, structures, features, annotations and cross-references |
8371 |
| sequence_protein |
Protein sequence |
2546 |
| sequence_rna |
Nucleotide sequence
of coding region |
363 |
| sequence_genomic |
Nucleotide sequence
of genomic region ± 1000 bases around
coding sequence |
368 |
| gene-structure |
Exon/intron/UTR
structure of genes (note there may be multiple gene structures) |
2423 |
| gene_region |
Genes in the region
of each genomic sequence |
366 |
| knockouts |
T-DNA insertional
knockouts isolated in this project |
33 |
| annotation_basic |
Basic annotation |
3504 |
| citation |
Literature citations
for sequences, features, feature methods, annotations, etc. |
4102 |
| feature |
Pattern descriptions
used to identify sequence features, e.g. domains, motifs, etc. |
214 |
| feature_method |
Computational methods
used to identify sequence features |
3 |
| feature_instance |
Occurrences of sequence
features in particular sequences |
8875 |
| xref |
Cross-references to external databases
such as GenBank, EMBL, PDB, SWISS-PROT, PIR, etc. |
5108 |
