Table 3. Haplotype frequencies in the Sorbs and the WTCCC T2D case sample.
| Rank | Haplotype | Frequency (%) Sorbs | Posterior mean lnBMI | Posterior SD lnBMI | Frequency (%) WTCCC T2D cases |
|---|---|---|---|---|---|
| 1 | GTGTA | 57.1 | 1.65 | 0.005 | 53.5 |
| 2 | GAGGC | 18.2 | 1.61 | 0.010 | 21.7 |
| 3 | AAGTA | 15.8 | 1.64 | 0.007 | 16.9 |
| 4 | GTATA | 6.4 | 1.64 | 0.005 | 4.1 |
| 5 | GAGTA | 2.3 | 1.65 | 0.007 | 2.7 |
| 6 | GTGGC | 0.2 | 1.63 | 0.069 | 0.4 |
| 7 | AAGTC | 0.1 | 1.62 | 0.023 | <0.1 |
| 8 | AAGGC | — | 0.6 | ||
| 9 | ATGTA | — | 0.1 | ||
| 10 | GAGTC | — | <0.1 | ||
| 11 | GTAGC | — | <0.1 |
Haplotype frequencies, posterior mean and standard deviation lnBMI for SNPs rs9972717, rs10852522, rs10521308, rs17818902, rs17818920 in the Sorbian population and haplotype frequencies in the WTCCC T2D cases. The haplotypes are presented in order of frequency in the Sorbs, where rank 1 is the most common, and are used as labels in Supplementary Figure 1.