Table 1. Definition of the repeat, as originally published for the main SCA loci.
ATAXIA | Gene name | Repeat | Referencesa |
---|---|---|---|
SCA1 | ATXN1 | (CAG)n(CAT)n(CAG)nb | Orr et al15; Chung et al16; Sobczak et al17 |
DRPLA | ATN1 | (CAG)n | Koide et al (1994); Nagafuchi et al (1994) |
SCA2 | ATXN2 | [(CAG)n CAA (CAG)n]nc | Sobczak et al17; Pulst et al18 |
MJD/SCA3 | ATXN3 | (CAG)2 CAA AAG CAG CAA (CAG)n | Kawaguchi et al19; Maciel et al20 |
SCA6 | CACNA1A | (CAG)n | Zhuchenko et al13 |
SCA7 | ATXN7 | (CAG)n | David et al14 |
SCA8 | ATXN8 | (CAG/TAG)n | Koob et al28 |
SCA10 | ATXN10 | (ATTCT)nd | Matsuura et al (2000) |
SCA12 | PPP2R2B | (CAG)n | Holmes et al (1999) |
SCA17 | TBP | [(CAG)n (CAA)n (CAG)n]n | Koide et al21 |
Full references are available at: http://www.scabase.eu.
May be interrupted by 1 to 3, or exceptionally 4, CATs.
The CAG repeat may be pure or have 1–4 CAA interruptions.
Interruptions with multiple pentarepeats (ATGCT, ATTGT or TTTCT) or septarepeats (ATTCTAT, ATTTTCT and ATATTCT) or complex ATTGT-TTTCT repeats may be found.