Table 2. Primers used in this study.
Information about the primers | |||
For dsRNA | |||
Name of primers | Nucleotide sequence (5′–3′) | ||
dsEcR-F* | GGATCCTAATACGACTCACTATAGG GTGTCGGTTGAAGAAATGTCT | ||
dsEcR-R* | GGATCCTAATACGACTCACTATAGG CGCAACATCATCACCTCACT | ||
dsEcR-SF | GTGTCGGTTGAAGAAATGTCT | ||
dsEcR-SR | CGCAACATCATCACCTCACT | ||
dsGFP-F* | GGATCCTAATACGACTCACTATAGG AAGGGCGAGGAGCTGTTCACCG | ||
dsGFP-R* | GGATCCTAATACGACTCACTATAGG CAGCAGGACCATGTGATCGCGC | ||
dsGFP-SF | AAGGGCGAGGAGCTGTTCACCG | ||
dsGFP-SR | CAGCAGGACCATGTGATCGCGC | ||
For SeEcR cloning | |||
Name of primers | Degenerate primers (5′–3′) | ||
SeEcR-F | CCNCGGCARCARGAGGAGC | ||
SeEcR-R | TCCTCBTCNGANGGCTG | ||
Nested PCR primers (5′–3′) | |||
5-SeEcR-1 | GAATCGTGGCACCACCTCGTGAAT | ||
5-SeEcR-2 | GAGGCGGTGGATCACACTGCAT | ||
3-SeEcR-1 | GTGTCGGTTGAAGAAATGTCT | ||
3-SeEcR-2 | ATGCAGTGTGATCCACCGCCTC | ||
For quantitative real-time RT-PCR | |||
Gene | Forward (5′–3′) | Reverse (5′–3′) | |
SeEcRcom | GTGAGGTGATGATGTTGCGAGTA | AGAAAATGACGATGGCAGTGAG | |
SeTre-1 | GGTTGGGACTTCTCAACGCGC | GACAGCATCCCGGTGATTCCC | |
SeTre-2 | GGCAGGCGTCGGGATTACTTC | GGCCAGGCATTCGGATAGTCC | |
SeG6PI | ATCAGTGGACAGTGGAAAGGGTA | TTGAGGTGGTTGGCGTAAGG | |
SeUAP | CCTGATGGCAACGGAGGACTG | CAACTTTCGCCGCACAGTCAG | |
SeCHSA | GGCTCGGGTCCTCATAACGTC | GTACCTGGTCCATCGTTGGCG | |
SeCHSB | GCTCGGTTCTGCGGTTGTGTC | CCATAGCCACGTCACACGCTC |
* The sequence in bond at the 5′ end of the primer is T7 promoter sequence.