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. 2010 Nov 3;10:277. doi: 10.1186/1471-2180-10-277

Table 1.

Oligonucleotides used in this study

Numbera Name Target/Purpose Sequence (5' to 3')b
1 Bsamut-fwd Introduction of silent mutation in OspA L10 codon yielding BsaI site GGGAATAGGTCTCATATTAGCCTTAATAGC
2 Bsamut-rev Introduction of silent mutation in OspA L10 codon yielding BsaI site TGCTATTAAGGCTAATATGAGACCTATTCC
3 Bstmut-fwd Introduction of silent mutation in mRFP1 V15R16 codons yielding BstBI site TGCGCTTCAAGGTTCGAATGGAGGGCTCCG
4 Bstmut-rev Introduction of silent mutation in mRFP1 V15R16 codons yielding BstBI site GGAGCCCTCCATTCGAACCTTGAAGCGCATGAAC
5 Rmut-oligo Random mutagenesis oligo TATTTATTGGGAATAGGTCTCATATTAGCCTTAATAGCATGTAAGCAAAATGCCTCCTCCNNKNNKGTCATCAAGGAGTTCATGCGCTTCAAGGTTCGAATGGAGGGCTCCGTG
6 Rmut-rev Generation of double-stranded DNA from Rmut-oligo CACGGAGCCCTCCATTCGAACC
7 Mutscreen-fwd Amplification of mutated ospA:mrfp1 region from PflaB ATGCTATTGCTATTTGCGTTTC
8 Mutscreen-rev Amplification of mutated ospA:mrfp1 region from ospA ATGGTCTTCTTCTGCATTAC
9 Mutscreen-seq Sequencing of amplified ospA:mrfp1 region from PflaB AAAGGATTTGCCAAAGTCAG

aNumbers correspond to primer numbers indicated in Figure 1.

bIntroduced restriction sites are underlined; mutated nucleotides are in bold.