TABLE 1.
Enzymeb | Cofactor | kcat (min−1) | KmAc (μM) | KmBd (mM) | KiAe (μM) | Rself | Reference |
---|---|---|---|---|---|---|---|
S. stipitis WT | NADPH | 63 × 101 | 2.5 | 47 | −g | − | 44 |
NADH | 42 × 101 | 31 | 32 | − | |||
Candida tenius WT | NADPH | 78 × 101 | 3.0 | 96 | 1.0 | 0.03 | 32 |
NADH | 66 × 101 | 38 | 142 | 19 | |||
S. stipitis WT | NADPH | 0.30h | 1.0 | 62 | 1.4 | 0.04 | 2 |
NADH | 0.21h | 29 | 59 | 26 | |||
C. tenius R276H | NADPH | 90 × 101 | 4.0 | 107 | 3.0 | 0.24 | 32 |
NADH | 13 × 102 | 15 | 94 | 20 | |||
S. stipitis R276H | NADPH | 16 | 1.7 | 53 | − | − | 44 |
NADH | 41 × 101 | 17 | 46 | − | |||
C. tenius N272D | NADPH | 22 × 102 | 17 | 170 | 21 | 0.23 | 32 |
NADH | 84 × 101 | 26 | 99 | 60 | |||
S. stipitis K270R | NADPH | 2.1h | 26 | 468 | 23 | 0.59 | 2 |
NADH | 0.96h | 63 | 145 | 57 | |||
C. tenius K270R | NADPH | 16 × 102 | 5.0 | 350 | 3.0 | 1.5 | 32 |
NADH | 48 × 101 | 21 | 54 | 4.0 | |||
S. stipitis K270R/N272D | NADPH | 19 × 102 | 2810 | 350 | − | − | 44 |
NADH | 71 × 101 | 138 | 68 | − | |||
C. tenius K270R/N272D | NADPH | 38 × 102 | 128 | 722 | 64 | 2.7 | 32 |
NADH | 72 × 101 | 41 | 106 | 30 |
Uncertainties of values are not reported, since the manner of calculation differed among investigations.
Enzymes are listed in the general order of increasing NADH specificity, Rsel. For the sake of comparison, amino acid residues are numbered in relation to the S. stipitis XR. WT, wild type.
A is the cofactor NADH or NADPH; KmA is the cofactor affinity constant.
B is the substrate xylose; KmB is the substrate affinity constant.
A is the cofactor NADH or NADPH; KiA is the cofactor dissociation constant.
The selectivity ratio, Rsel, is given by [Vmax/KiAKmB]NADH/[Vmax/KiAKmB]NADPH. Vmax is the maximum reaction rate.
−, missing data.
Vmax (U/mg protein) was determined instead of kcat.