Dataset | 16S.M.aa_ag | 16S.M | 23S.M | 23S.M.aa_ag | 23S.E.aa_ag | 23S.E | ||||||
Align | Tree | Align | Tree | Align | Tree | Align | Tree | Align | Tree | Align | Tree | |
SATé | 114.5 | 106.0 | 68.9 | 67.2 | 61.8 | 60.0 | ||||||
ML(MAFFT) | 9.2 | 7.6 | 5.8 | 3.6 | 2.8 | 2.2 | 1.7 | 1.1 | 0.9 | 0.4 | 0.8 | 0.3 |
ML(MAFFT-PartTree) | <0.1 | 9.4 | <0.1 | 6.6 | <0.1 | 1.9 | <0.1 | 1.6 | <0.1 | 0.7 | <0.1 | 0.6 |
ML(Prank+GT) | 15.4 | 17.1 | 9.7 | 12.5 | 7.6 | 3.3 | 5.3 | 2.6 | 8.3 | 0.8 | 7.4 | 0.7 |
ML(Muscle) | 9.4 | 6.1 | 10.3 | 7.6 | 3.1 | 1.1 | 2.5 | 1.6 | 0.6 | 0.5 | 0.4 | 0.4 |
ML(ClustalW) | 5.6 | 4.5 | 6.3 | 2.5 | 1.5 | 0.7 | 1.3 | 0.8 | 2.0 | 0.4 | 1.7 | 0.3 |
ML(ClustalW-quicktree) | 0.9 | 4.3 | 0.9 | 3.6 | 0.5 | 1.5 | 0.4 | 1.2 | 0.7 | 0.7 | 0.7 | 0.5 |
ML(Opal) | 3.4 | 14.3 | 3.2 | 8.1 | 2.8 | 2.8 | 2.1 | 1.9 | 3.8 | 0.8 | 4.1 | 0.4 |